Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H12DA2A288 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3H12DA2A288 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.53■□□□□ 0.88
ZC3H12DA2A288 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.53■□□□□ 0.88
ZC3H12DA2A288 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H12DA2A288 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3H12DA2A288 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.53■□□□□ 0.88
ZC3H12DA2A288 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H12DA2A288 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H12DA2A288 ANOS2P-203ENST00000472227 1816 ntBASIC20.53■□□□□ 0.88
ZC3H12DA2A288 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H12DA2A288 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H12DA2A288 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.53■□□□□ 0.88
ZC3H12DA2A288 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H12DA2A288 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
ZC3H12DA2A288 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZC3H12DA2A288 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H12DA2A288 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H12DA2A288 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
ZC3H12DA2A288 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.51■□□□□ 0.87
ZC3H12DA2A288 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H12DA2A288 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
ZC3H12DA2A288 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H12DA2A288 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.5■□□□□ 0.87
ZC3H12DA2A288 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.5■□□□□ 0.87
ZC3H12DA2A288 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H12DA2A288 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ZC3H12DA2A288 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.5■□□□□ 0.87
ZC3H12DA2A288 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ZC3H12DA2A288 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
ZC3H12DA2A288 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H12DA2A288 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H12DA2A288 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
ZC3H12DA2A288 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H12DA2A288 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H12DA2A288 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ZC3H12DA2A288 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H12DA2A288 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H12DA2A288 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H12DA2A288 TSPY9P-201ENST00000440215 945 ntBASIC20.48■□□□□ 0.87
ZC3H12DA2A288 TSPY11P-201ENST00000442607 1045 ntBASIC20.48■□□□□ 0.87
ZC3H12DA2A288 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.48■□□□□ 0.87
ZC3H12DA2A288 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.48■□□□□ 0.87
ZC3H12DA2A288 MIR6722-201ENST00000617286 78 ntBASIC20.48■□□□□ 0.87
ZC3H12DA2A288 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.48■□□□□ 0.87
ZC3H12DA2A288 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H12DA2A288 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H12DA2A288 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H12DA2A288 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.47■□□□□ 0.87
ZC3H12DA2A288 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H12DA2A288 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ZC3H12DA2A288 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H12DA2A288 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.47■□□□□ 0.87
ZC3H12DA2A288 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.47■□□□□ 0.87
ZC3H12DA2A288 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H12DA2A288 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ZC3H12DA2A288 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H12DA2A288 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H12DA2A288 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H12DA2A288 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H12DA2A288 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H12DA2A288 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H12DA2A288 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.46■□□□□ 0.87
ZC3H12DA2A288 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H12DA2A288 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H12DA2A288 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.46■□□□□ 0.87
ZC3H12DA2A288 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H12DA2A288 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms