Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV12-3A0A0B4J271 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV12-3A0A0B4J271 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV12-3A0A0B4J271 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRAV12-3A0A0B4J271 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV12-3A0A0B4J271 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRAV12-3A0A0B4J271 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
TRAV12-3A0A0B4J271 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
TRAV12-3A0A0B4J271 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV12-3A0A0B4J271 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV12-3A0A0B4J271 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRAV12-3A0A0B4J271 AC092068.2-201ENST00000590491 1708 ntBASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 AC103834.1-201ENST00000520383 144 ntBASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-3A0A0B4J271 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-3A0A0B4J271 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRAV12-3A0A0B4J271 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV12-3A0A0B4J271 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRAV12-3A0A0B4J271 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-3A0A0B4J271 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV12-3A0A0B4J271 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-3A0A0B4J271 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
TRAV12-3A0A0B4J271 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-3A0A0B4J271 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV12-3A0A0B4J271 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV12-3A0A0B4J271 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV12-3A0A0B4J271 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV12-3A0A0B4J271 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV12-3A0A0B4J271 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV12-3A0A0B4J271 AC004448.1-201ENST00000458332 883 ntBASIC16.65■□□□□ 0.26
TRAV12-3A0A0B4J271 AC103724.3-201ENST00000564481 992 ntBASIC16.65■□□□□ 0.26
TRAV12-3A0A0B4J271 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRAV12-3A0A0B4J271 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV12-3A0A0B4J271 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV12-3A0A0B4J271 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-3A0A0B4J271 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 DUSP8P3-201ENST00000399571 1760 ntBASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-3A0A0B4J271 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-3A0A0B4J271 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-3A0A0B4J271 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-3A0A0B4J271 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-3A0A0B4J271 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TRAV12-3A0A0B4J271 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-3A0A0B4J271 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-3A0A0B4J271 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRAV12-3A0A0B4J271 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TRAV12-3A0A0B4J271 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV12-3A0A0B4J271 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV12-3A0A0B4J271 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms