Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV2A0A0B4J234 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.94■□□□□ 0.3
TRAV2A0A0B4J234 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV2A0A0B4J234 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV2A0A0B4J234 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV2A0A0B4J234 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV2A0A0B4J234 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV2A0A0B4J234 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV2A0A0B4J234 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV2A0A0B4J234 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAV2A0A0B4J234 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV2A0A0B4J234 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV2A0A0B4J234 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV2A0A0B4J234 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV2A0A0B4J234 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV2A0A0B4J234 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV2A0A0B4J234 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV2A0A0B4J234 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV2A0A0B4J234 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV2A0A0B4J234 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV2A0A0B4J234 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV2A0A0B4J234 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TRAV2A0A0B4J234 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV2A0A0B4J234 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV2A0A0B4J234 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV2A0A0B4J234 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV2A0A0B4J234 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 AL356740.2-201ENST00000601559 647 ntBASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV2A0A0B4J234 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
TRAV2A0A0B4J234 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 AL356441.2-201ENST00000443009 864 ntBASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 AC092068.2-201ENST00000590491 1708 ntBASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV2A0A0B4J234 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV2A0A0B4J234 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV2A0A0B4J234 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV2A0A0B4J234 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV2A0A0B4J234 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRAV2A0A0B4J234 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV2A0A0B4J234 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV2A0A0B4J234 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TRAV2A0A0B4J234 MIR3621-201ENST00000580529 85 ntBASIC16.87■□□□□ 0.29
TRAV2A0A0B4J234 FP325331.1-202ENST00000623531 1380 ntBASIC16.87■□□□□ 0.29
TRAV2A0A0B4J234 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV2A0A0B4J234 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV2A0A0B4J234 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV2A0A0B4J234 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV2A0A0B4J234 AL117332.1-201ENST00000622628 974 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms