Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 AC137630.3-201ENST00000607245 391 ntBASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 SNX5-217ENST00000606557 1087 ntBASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-8A0A0A6YYG3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 AC079630.1-202ENST00000618127 1840 ntBASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-8A0A0A6YYG3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV6-8A0A0A6YYG3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV6-8A0A0A6YYG3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV6-8A0A0A6YYG3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV6-8A0A0A6YYG3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-8A0A0A6YYG3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV6-8A0A0A6YYG3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV6-8A0A0A6YYG3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-8A0A0A6YYG3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms