Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV18A0A075B6X5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV18A0A075B6X5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV18A0A075B6X5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV18A0A075B6X5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TRAV18A0A075B6X5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 AL022069.1-201ENST00000568025 1636 ntBASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRAV18A0A075B6X5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 ESRRAP2-201ENST00000418437 1549 ntBASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV18A0A075B6X5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV18A0A075B6X5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAV18A0A075B6X5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV18A0A075B6X5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAV18A0A075B6X5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TRAV18A0A075B6X5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAV18A0A075B6X5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV18A0A075B6X5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAV18A0A075B6X5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV18A0A075B6X5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV18A0A075B6X5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV18A0A075B6X5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV18A0A075B6X5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV18A0A075B6X5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV18A0A075B6X5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRAV18A0A075B6X5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.28■□□□□ 0.68
TRAV18A0A075B6X5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.28■□□□□ 0.68
TRAV18A0A075B6X5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.28■□□□□ 0.68
TRAV18A0A075B6X5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV18A0A075B6X5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV18A0A075B6X5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV18A0A075B6X5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRAV18A0A075B6X5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV18A0A075B6X5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRAV18A0A075B6X5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV18A0A075B6X5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAV18A0A075B6X5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TRAV18A0A075B6X5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.27■□□□□ 0.68
TRAV18A0A075B6X5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAV18A0A075B6X5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.27■□□□□ 0.68
TRAV18A0A075B6X5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV18A0A075B6X5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TRAV18A0A075B6X5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAV18A0A075B6X5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV18A0A075B6X5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 AL592295.1-201ENST00000400984 884 ntBASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 RPS2P7-201ENST00000447334 885 ntBASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV18A0A075B6X5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms