Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHACTR1Q9C0D0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PHACTR1Q9C0D0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.42□□□□□ -0.1
PHACTR1Q9C0D0 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHACTR1Q9C0D0 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PHACTR1Q9C0D0 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHACTR1Q9C0D0 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PHACTR1Q9C0D0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHACTR1Q9C0D0 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHACTR1Q9C0D0 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PHACTR1Q9C0D0 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHACTR1Q9C0D0 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.42□□□□□ -0.1
PHACTR1Q9C0D0 AHCYP2-201ENST00000430630 1300 ntBASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 KRT18P36-201ENST00000411618 1276 ntBASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 AC006122.1-201ENST00000493323 440 ntBASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 PGAM1P5-201ENST00000548011 764 ntBASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 MIR4783-201ENST00000580343 82 ntBASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 FMO6P-201ENST00000236166 1620 ntBASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PHACTR1Q9C0D0 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 AC115284.2-201ENST00000624646 2054 ntBASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 ZNF493-208ENST00000599461 1769 ntBASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 AC144522.1-201ENST00000625111 1658 ntBASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.4□□□□□ -0.1
PHACTR1Q9C0D0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms