Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FYCO1Q9BQS8 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
FYCO1Q9BQS8 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC21.27■■□□□ 1
FYCO1Q9BQS8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC21.27■■□□□ 1
FYCO1Q9BQS8 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC21.27■■□□□ 1
FYCO1Q9BQS8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
FYCO1Q9BQS8 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC21.27■■□□□ 1
FYCO1Q9BQS8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FYCO1Q9BQS8 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC21.27■■□□□ 1
FYCO1Q9BQS8 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
FYCO1Q9BQS8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
FYCO1Q9BQS8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC21.27■■□□□ 1
FYCO1Q9BQS8 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
FYCO1Q9BQS8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FYCO1Q9BQS8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
FYCO1Q9BQS8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC21.27■■□□□ 1
FYCO1Q9BQS8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FYCO1Q9BQS8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
FYCO1Q9BQS8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
FYCO1Q9BQS8 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
FYCO1Q9BQS8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
FYCO1Q9BQS8 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
FYCO1Q9BQS8 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC21.27■□□□□ 0.99
FYCO1Q9BQS8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
FYCO1Q9BQS8 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 AC004522.1-201ENST00000419978 654 ntBASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 CCND3P1-201ENST00000438347 580 ntBASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 RN7SL684P-201ENST00000465665 294 ntBASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 AL627230.2-201ENST00000613254 655 ntBASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 SNORA57-201ENST00000383870 149 ntBASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 HNRNPA3P12-201ENST00000437410 1063 ntBASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 RNU1-80P-201ENST00000459500 161 ntBASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 BCL2L12P1-201ENST00000508390 733 ntBASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 AC120498.7-201ENST00000562876 330 ntBASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 RN7SL162P-201ENST00000579233 292 ntBASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 MIR5001-201ENST00000580185 100 ntBASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 AC123912.6-201ENST00000612657 315 ntBASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
FYCO1Q9BQS8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 AL596257.1-201ENST00000641463 2694 ntBASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 AC108024.1-201ENST00000626286 1721 ntBASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 MTHFD2P7-201ENST00000483867 983 ntBASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 BEND3P1-201ENST00000421591 1944 ntBASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 KRT8P38-201ENST00000441370 1430 ntBASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 AC111170.3-201ENST00000624282 2464 ntBASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FYCO1Q9BQS8 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FYCO1Q9BQS8 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FYCO1Q9BQS8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC21.24■□□□□ 0.99
FYCO1Q9BQS8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC21.24■□□□□ 0.99
FYCO1Q9BQS8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FYCO1Q9BQS8 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FYCO1Q9BQS8 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FYCO1Q9BQS8 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FYCO1Q9BQS8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
FYCO1Q9BQS8 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
FYCO1Q9BQS8 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms