Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 E2F3P2-201ENST00000447755 1422 ntBASIC12.63□□□□□ -0.39
VRK1Q99986 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
VRK1Q99986 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.63□□□□□ -0.39
VRK1Q99986 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VRK1Q99986 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
VRK1Q99986 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.63□□□□□ -0.39
VRK1Q99986 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
VRK1Q99986 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.63□□□□□ -0.39
VRK1Q99986 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.63□□□□□ -0.39
VRK1Q99986 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.63□□□□□ -0.39
VRK1Q99986 TLE1P1-201ENST00000422965 589 ntBASIC12.63□□□□□ -0.39
VRK1Q99986 Z97180.1-201ENST00000445173 988 ntBASIC12.63□□□□□ -0.39
VRK1Q99986 BX284668.4-201ENST00000453917 508 ntBASIC12.63□□□□□ -0.39
VRK1Q99986 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.63□□□□□ -0.39
VRK1Q99986 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.63□□□□□ -0.39
VRK1Q99986 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.63□□□□□ -0.39
VRK1Q99986 DUX4L46-201ENST00000566845 751 ntBASIC12.63□□□□□ -0.39
VRK1Q99986 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 AL606495.2-201ENST00000605867 535 ntBASIC12.63□□□□□ -0.39
VRK1Q99986 AL136295.7-201ENST00000619226 1200 ntBASIC12.63□□□□□ -0.39
VRK1Q99986 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.63□□□□□ -0.39
VRK1Q99986 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 AL118506.1-201ENST00000601296 3082 ntBASIC12.63□□□□□ -0.39
VRK1Q99986 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 AC020658.7-201ENST00000624274 2442 ntBASIC12.63□□□□□ -0.39
VRK1Q99986 AC003102.2-201ENST00000589195 1469 ntBASIC12.63□□□□□ -0.39
VRK1Q99986 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.63□□□□□ -0.39
VRK1Q99986 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.63□□□□□ -0.39
VRK1Q99986 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
VRK1Q99986 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VRK1Q99986 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
VRK1Q99986 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
VRK1Q99986 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.63□□□□□ -0.39
VRK1Q99986 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
VRK1Q99986 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 AC004899.1-201ENST00000424687 1714 ntBASIC12.62□□□□□ -0.39
VRK1Q99986 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
VRK1Q99986 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
VRK1Q99986 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
VRK1Q99986 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.62□□□□□ -0.39
VRK1Q99986 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
VRK1Q99986 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 AC011742.3-201ENST00000439053 820 ntBASIC12.62□□□□□ -0.39
VRK1Q99986 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.62□□□□□ -0.39
VRK1Q99986 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.62□□□□□ -0.39
VRK1Q99986 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms