Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 CICP1-201ENST00000416803 2410 ntBASIC11.54□□□□□ -0.56
RAB40CQ96S21 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 AC093004.1-201ENST00000508850 424 ntBASIC11.54□□□□□ -0.56
RAB40CQ96S21 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 AL355385.1-201ENST00000606123 409 ntBASIC11.54□□□□□ -0.56
RAB40CQ96S21 AL096865.1-201ENST00000606796 927 ntBASIC11.54□□□□□ -0.56
RAB40CQ96S21 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 RCC2P1-201ENST00000452257 1476 ntBASIC11.54□□□□□ -0.56
RAB40CQ96S21 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 AC022137.2-201ENST00000503482 481 ntBASIC11.53□□□□□ -0.56
RAB40CQ96S21 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 AL391280.1-201ENST00000506969 1062 ntBASIC11.53□□□□□ -0.56
RAB40CQ96S21 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 AC092552.1-201ENST00000547243 906 ntBASIC11.53□□□□□ -0.56
RAB40CQ96S21 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 RN7SL48P-201ENST00000579283 293 ntBASIC11.53□□□□□ -0.56
RAB40CQ96S21 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 AC004233.3-201ENST00000607794 1269 ntBASIC11.53□□□□□ -0.56
RAB40CQ96S21 AC093726.1-201ENST00000608064 963 ntBASIC11.53□□□□□ -0.56
RAB40CQ96S21 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 AC005014.1-201ENST00000432006 2976 ntBASIC11.53□□□□□ -0.56
RAB40CQ96S21 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms