Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LMO3Q8TAP4 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LMO3Q8TAP4 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
LMO3Q8TAP4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
LMO3Q8TAP4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
LMO3Q8TAP4 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 AC019294.4-201ENST00000561777 2905 ntBASIC15.03■□□□□ -0
LMO3Q8TAP4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.03■□□□□ -0
LMO3Q8TAP4 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC15.03■□□□□ -0
LMO3Q8TAP4 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC15.03■□□□□ -0
LMO3Q8TAP4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.03■□□□□ -0
LMO3Q8TAP4 AF013593.1-201ENST00000458074 1487 ntBASIC15.03■□□□□ -0
LMO3Q8TAP4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.03■□□□□ -0
LMO3Q8TAP4 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 AC138761.6-201ENST00000583997 1423 ntBASIC15.03■□□□□ -0
LMO3Q8TAP4 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
LMO3Q8TAP4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 MIR557-201ENST00000385239 98 ntBASIC15.03■□□□□ -0
LMO3Q8TAP4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.03■□□□□ -0
LMO3Q8TAP4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.03■□□□□ -0
LMO3Q8TAP4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.03■□□□□ -0
LMO3Q8TAP4 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.03■□□□□ -0
LMO3Q8TAP4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.03■□□□□ -0
LMO3Q8TAP4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.03■□□□□ -0
LMO3Q8TAP4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
LMO3Q8TAP4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.03■□□□□ -0
LMO3Q8TAP4 AC242376.1-201ENST00000559033 726 ntBASIC15.03■□□□□ -0
LMO3Q8TAP4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.03■□□□□ -0
LMO3Q8TAP4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.03■□□□□ -0
LMO3Q8TAP4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
LMO3Q8TAP4 AC020922.3-201ENST00000595064 547 ntBASIC15.03■□□□□ -0
LMO3Q8TAP4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.03■□□□□ -0
LMO3Q8TAP4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.03■□□□□ -0
LMO3Q8TAP4 AL356740.1-201ENST00000602192 1297 ntBASIC15.03■□□□□ -0
LMO3Q8TAP4 AC009560.1-201ENST00000620208 434 ntBASIC15.03■□□□□ -0
LMO3Q8TAP4 AC020763.3-201ENST00000625095 2904 ntBASIC15.03■□□□□ -0
LMO3Q8TAP4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.03■□□□□ -0
LMO3Q8TAP4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.03■□□□□ -0
LMO3Q8TAP4 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
LMO3Q8TAP4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.03■□□□□ -0
LMO3Q8TAP4 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LMO3Q8TAP4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO3Q8TAP4 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.02■□□□□ -0
LMO3Q8TAP4 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC15.02■□□□□ -0
LMO3Q8TAP4 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LMO3Q8TAP4 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
LMO3Q8TAP4 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LMO3Q8TAP4 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
LMO3Q8TAP4 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.02■□□□□ -0
LMO3Q8TAP4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.02■□□□□ -0
LMO3Q8TAP4 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LMO3Q8TAP4 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LMO3Q8TAP4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.02■□□□□ -0
LMO3Q8TAP4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LMO3Q8TAP4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LMO3Q8TAP4 KRT18P9-201ENST00000604826 1300 ntBASIC15.02■□□□□ -0
LMO3Q8TAP4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.02■□□□□ -0
LMO3Q8TAP4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.02■□□□□ -0
LMO3Q8TAP4 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.02■□□□□ -0
LMO3Q8TAP4 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LMO3Q8TAP4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LMO3Q8TAP4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.02■□□□□ -0
LMO3Q8TAP4 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LMO3Q8TAP4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.02■□□□□ -0
LMO3Q8TAP4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.02■□□□□ -0
LMO3Q8TAP4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.02■□□□□ -0
LMO3Q8TAP4 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.02■□□□□ -0
LMO3Q8TAP4 DUTP3-201ENST00000450025 415 ntBASIC15.02■□□□□ -0
LMO3Q8TAP4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.02■□□□□ -0
LMO3Q8TAP4 RN7SL788P-201ENST00000460504 316 ntBASIC15.02■□□□□ -0
LMO3Q8TAP4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.02■□□□□ -0
LMO3Q8TAP4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.02■□□□□ -0
LMO3Q8TAP4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.02■□□□□ -0
LMO3Q8TAP4 MIR6787-201ENST00000616675 61 ntBASIC15.02■□□□□ -0
LMO3Q8TAP4 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LMO3Q8TAP4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LMO3Q8TAP4 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LMO3Q8TAP4 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.02□□□□□ -0.01
LMO3Q8TAP4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LMO3Q8TAP4 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LMO3Q8TAP4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LMO3Q8TAP4 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.02□□□□□ -0.01
LMO3Q8TAP4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms