Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC21.62■■□□□ 1.05
VPS8Q8N3P4 MIR6727-201ENST00000620702 65 ntBASIC21.62■■□□□ 1.05
VPS8Q8N3P4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 AC130686.1-201ENST00000622936 2466 ntBASIC21.61■■□□□ 1.05
VPS8Q8N3P4 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 RN7SL396P-201ENST00000471086 295 ntBASIC21.61■■□□□ 1.05
VPS8Q8N3P4 ALG1L6P-201ENST00000515248 758 ntBASIC21.61■■□□□ 1.05
VPS8Q8N3P4 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 USB1-205ENST00000561743 1135 ntTSL 3 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 AC011471.3-201ENST00000623576 402 ntBASIC21.61■■□□□ 1.05
VPS8Q8N3P4 AC127024.7-201ENST00000625101 200 ntBASIC21.61■■□□□ 1.05
VPS8Q8N3P4 Z82244.1-201ENST00000631502 840 ntBASIC21.61■■□□□ 1.05
VPS8Q8N3P4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
VPS8Q8N3P4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 AL672207.1-201ENST00000328462 1570 ntBASIC21.6■■□□□ 1.05
VPS8Q8N3P4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 FAM21EP-201ENST00000417804 985 ntBASIC21.6■■□□□ 1.05
VPS8Q8N3P4 AC103563.1-201ENST00000429316 123 ntBASIC21.6■■□□□ 1.05
VPS8Q8N3P4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 AC009474.1-201ENST00000455096 1565 ntBASIC21.6■■□□□ 1.05
VPS8Q8N3P4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 RN7SL818P-201ENST00000485099 259 ntBASIC21.6■■□□□ 1.05
VPS8Q8N3P4 ALG1L7P-201ENST00000502317 768 ntBASIC21.6■■□□□ 1.05
VPS8Q8N3P4 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 MBP-238ENST00000580402 915 ntTSL 5 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 RN7SL725P-201ENST00000606439 259 ntBASIC21.6■■□□□ 1.05
VPS8Q8N3P4 AC008972.2-201ENST00000606587 494 ntBASIC21.6■■□□□ 1.05
VPS8Q8N3P4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
VPS8Q8N3P4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms