Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC015909.5-201ENST00000624336 2266 ntBASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 BANF1P3-201ENST00000412556 261 ntBASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 RPL8P2-201ENST00000430538 502 ntBASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 AC234782.1-201ENST00000451950 919 ntBASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 BRD7P5-201ENST00000299197 1822 ntBASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 RN7SL258P-201ENST00000478664 300 ntBASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 RN7SL67P-201ENST00000492147 296 ntBASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 CICP16-201ENST00000502609 2813 ntBASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 AC079328.1-201ENST00000560358 952 ntBASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 AC118758.2-201ENST00000614242 2813 ntBASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 AC006453.1-201ENST00000636037 1257 ntBASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.79□□□□□ -0.04
RFWD3Q6PCD5 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms