Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RAE1P78406 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.38□□□□□ -0.27
RAE1P78406 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.38□□□□□ -0.27
RAE1P78406 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.38□□□□□ -0.27
RAE1P78406 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 DUX4L50-201ENST00000455245 715 ntBASIC13.38□□□□□ -0.27
RAE1P78406 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.38□□□□□ -0.27
RAE1P78406 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.38□□□□□ -0.27
RAE1P78406 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.38□□□□□ -0.27
RAE1P78406 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.38□□□□□ -0.27
RAE1P78406 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 AL645939.5-201ENST00000606834 243 ntBASIC13.38□□□□□ -0.27
RAE1P78406 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 AC026740.1-201ENST00000607068 791 ntBASIC13.38□□□□□ -0.27
RAE1P78406 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 AC079336.7-201ENST00000623428 1078 ntBASIC13.38□□□□□ -0.27
RAE1P78406 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.38□□□□□ -0.27
RAE1P78406 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 AC005562.1-201ENST00000583030 3219 ntBASIC13.38□□□□□ -0.27
RAE1P78406 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.38□□□□□ -0.27
RAE1P78406 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.38□□□□□ -0.27
RAE1P78406 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RAE1P78406 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RAE1P78406 Z98885.3-201ENST00000624882 1757 ntBASIC13.37□□□□□ -0.27
RAE1P78406 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RAE1P78406 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.37□□□□□ -0.27
RAE1P78406 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.37□□□□□ -0.27
RAE1P78406 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.37□□□□□ -0.27
RAE1P78406 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.37□□□□□ -0.27
RAE1P78406 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.37□□□□□ -0.27
RAE1P78406 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 KRT8P1-201ENST00000557533 1207 ntBASIC13.37□□□□□ -0.27
RAE1P78406 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.37□□□□□ -0.27
RAE1P78406 MEG3_2.1-201ENST00000611456 105 ntBASIC13.37□□□□□ -0.27
RAE1P78406 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
RAE1P78406 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAE1P78406 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.37□□□□□ -0.27
RAE1P78406 MIR497HG-202ENST00000572453 3838 ntBASIC13.37□□□□□ -0.27
RAE1P78406 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms