Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.93■□□□□ 0.14
CCNA1P78396 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.93■□□□□ 0.14
CCNA1P78396 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.93■□□□□ 0.14
CCNA1P78396 GULOP-201ENST00000454030 748 ntBASIC15.93■□□□□ 0.14
CCNA1P78396 TBC1D3P6-201ENST00000505954 962 ntBASIC15.93■□□□□ 0.14
CCNA1P78396 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC15.93■□□□□ 0.14
CCNA1P78396 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC15.93■□□□□ 0.14
CCNA1P78396 URAHP-205ENST00000610227 398 ntBASIC15.93■□□□□ 0.14
CCNA1P78396 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.93■□□□□ 0.14
CCNA1P78396 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CCNA1P78396 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CCNA1P78396 AC113367.3-201ENST00000508316 1912 ntBASIC15.93■□□□□ 0.14
CCNA1P78396 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCNA1P78396 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CCNA1P78396 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.93■□□□□ 0.14
CCNA1P78396 TUBB8P4-201ENST00000511806 1324 ntBASIC15.93■□□□□ 0.14
CCNA1P78396 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.93■□□□□ 0.14
CCNA1P78396 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CCNA1P78396 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.92■□□□□ 0.14
CCNA1P78396 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.92■□□□□ 0.14
CCNA1P78396 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CCNA1P78396 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCNA1P78396 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 NHP2P1-201ENST00000335274 462 ntBASIC15.92■□□□□ 0.14
CCNA1P78396 SIRPB3P-201ENST00000340424 1216 ntBASIC15.92■□□□□ 0.14
CCNA1P78396 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.92■□□□□ 0.14
CCNA1P78396 AC092570.1-201ENST00000414446 469 ntBASIC15.92■□□□□ 0.14
CCNA1P78396 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.92■□□□□ 0.14
CCNA1P78396 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC15.92■□□□□ 0.14
CCNA1P78396 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.92■□□□□ 0.14
CCNA1P78396 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC15.92■□□□□ 0.14
CCNA1P78396 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC15.92■□□□□ 0.14
CCNA1P78396 AC023968.2-201ENST00000560593 1049 ntBASIC15.92■□□□□ 0.14
CCNA1P78396 MIR5001-201ENST00000580185 100 ntBASIC15.92■□□□□ 0.14
CCNA1P78396 MIR8071-1-201ENST00000616769 65 ntBASIC15.92■□□□□ 0.14
CCNA1P78396 MIR8071-2-201ENST00000616772 65 ntBASIC15.92■□□□□ 0.14
CCNA1P78396 AC148477.9-201ENST00000623974 539 ntBASIC15.92■□□□□ 0.14
CCNA1P78396 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCNA1P78396 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.92■□□□□ 0.14
CCNA1P78396 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.92■□□□□ 0.14
CCNA1P78396 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCNA1P78396 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
CCNA1P78396 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.92■□□□□ 0.14
CCNA1P78396 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
CCNA1P78396 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.92■□□□□ 0.14
CCNA1P78396 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.92■□□□□ 0.14
CCNA1P78396 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCNA1P78396 AC144831.1-201ENST00000573312 2656 ntBASIC15.91■□□□□ 0.14
CCNA1P78396 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCNA1P78396 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCNA1P78396 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.91■□□□□ 0.14
CCNA1P78396 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCNA1P78396 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCNA1P78396 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.91■□□□□ 0.14
CCNA1P78396 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms