Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.48□□□□□ -0.25
SKP1P63208 NUP210P1-202ENST00000504322 710 ntBASIC13.48□□□□□ -0.25
SKP1P63208 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.48□□□□□ -0.25
SKP1P63208 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.48□□□□□ -0.25
SKP1P63208 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.48□□□□□ -0.25
SKP1P63208 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.48□□□□□ -0.25
SKP1P63208 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SKP1P63208 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.48□□□□□ -0.25
SKP1P63208 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.48□□□□□ -0.25
SKP1P63208 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.48□□□□□ -0.25
SKP1P63208 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SKP1P63208 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 AL139158.3-201ENST00000641212 1562 ntBASIC13.48□□□□□ -0.25
SKP1P63208 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SKP1P63208 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.48□□□□□ -0.25
SKP1P63208 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.48□□□□□ -0.25
SKP1P63208 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
SKP1P63208 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
SKP1P63208 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.47□□□□□ -0.25
SKP1P63208 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 MARK2P16-201ENST00000605714 1723 ntBASIC13.47□□□□□ -0.25
SKP1P63208 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SKP1P63208 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.47□□□□□ -0.25
SKP1P63208 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
SKP1P63208 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 AL592076.1-201ENST00000424448 303 ntBASIC13.47□□□□□ -0.25
SKP1P63208 PDIA3P2-201ENST00000428073 158 ntBASIC13.47□□□□□ -0.25
SKP1P63208 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.47□□□□□ -0.25
SKP1P63208 AK2P2-201ENST00000439142 405 ntBASIC13.47□□□□□ -0.25
SKP1P63208 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.47□□□□□ -0.25
SKP1P63208 DUTP3-201ENST00000450025 415 ntBASIC13.47□□□□□ -0.25
SKP1P63208 AC073150.1-201ENST00000450406 1084 ntBASIC13.47□□□□□ -0.25
SKP1P63208 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.47□□□□□ -0.25
SKP1P63208 IGHJ2P-201ENST00000454480 60 ntBASIC13.47□□□□□ -0.25
SKP1P63208 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 AC022494.1-201ENST00000466044 728 ntBASIC13.47□□□□□ -0.25
SKP1P63208 RN7SL720P-201ENST00000488178 304 ntBASIC13.47□□□□□ -0.25
SKP1P63208 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.47□□□□□ -0.25
SKP1P63208 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.47□□□□□ -0.25
SKP1P63208 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.47□□□□□ -0.25
SKP1P63208 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.47□□□□□ -0.25
SKP1P63208 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 AL359881.3-201ENST00000602640 1721 ntBASIC13.47□□□□□ -0.25
SKP1P63208 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SKP1P63208 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.47□□□□□ -0.25
SKP1P63208 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms