Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.71□□□□□ -0.37
VBP1P61758 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
VBP1P61758 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
VBP1P61758 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VBP1P61758 AC092139.4-201ENST00000624318 2794 ntBASIC12.71□□□□□ -0.38
VBP1P61758 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VBP1P61758 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VBP1P61758 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
VBP1P61758 AC061965.1-201ENST00000560524 1465 ntBASIC12.71□□□□□ -0.38
VBP1P61758 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VBP1P61758 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VBP1P61758 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VBP1P61758 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VBP1P61758 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VBP1P61758 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.7□□□□□ -0.38
VBP1P61758 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
VBP1P61758 KRT8P28-201ENST00000433288 1390 ntBASIC12.7□□□□□ -0.38
VBP1P61758 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
VBP1P61758 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.7□□□□□ -0.38
VBP1P61758 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.7□□□□□ -0.38
VBP1P61758 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
VBP1P61758 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
VBP1P61758 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
VBP1P61758 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
VBP1P61758 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
VBP1P61758 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.7□□□□□ -0.38
VBP1P61758 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.7□□□□□ -0.38
VBP1P61758 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.7□□□□□ -0.38
VBP1P61758 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.7□□□□□ -0.38
VBP1P61758 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.7□□□□□ -0.38
VBP1P61758 HLA-J-203ENST00000494367 1087 ntBASIC12.7□□□□□ -0.38
VBP1P61758 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.7□□□□□ -0.38
VBP1P61758 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.7□□□□□ -0.38
VBP1P61758 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.7□□□□□ -0.38
VBP1P61758 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.7□□□□□ -0.38
VBP1P61758 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.7□□□□□ -0.38
VBP1P61758 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
VBP1P61758 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 AL445228.2-201ENST00000605589 952 ntBASIC12.7□□□□□ -0.38
VBP1P61758 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.7□□□□□ -0.38
VBP1P61758 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.7□□□□□ -0.38
VBP1P61758 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.7□□□□□ -0.38
VBP1P61758 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC12.7□□□□□ -0.38
VBP1P61758 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.7□□□□□ -0.38
VBP1P61758 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
VBP1P61758 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
VBP1P61758 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
VBP1P61758 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC12.7□□□□□ -0.38
VBP1P61758 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VBP1P61758 AL583810.2-201ENST00000556430 3254 ntBASIC12.7□□□□□ -0.38
VBP1P61758 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.69□□□□□ -0.38
VBP1P61758 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms