Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.2□□□□□ -0.46
AP3S2P59780 SHC1P1-201ENST00000425230 1745 ntBASIC12.2□□□□□ -0.46
AP3S2P59780 AL645937.6-201ENST00000641122 3727 ntBASIC12.2□□□□□ -0.46
AP3S2P59780 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 AC020917.4-201ENST00000623994 1999 ntBASIC12.19□□□□□ -0.46
AP3S2P59780 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 FAM90A11P-201ENST00000518378 2218 ntBASIC12.19□□□□□ -0.46
AP3S2P59780 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.19□□□□□ -0.46
AP3S2P59780 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.19□□□□□ -0.46
AP3S2P59780 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.19□□□□□ -0.46
AP3S2P59780 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.19□□□□□ -0.46
AP3S2P59780 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
AP3S2P59780 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
AP3S2P59780 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
AP3S2P59780 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
AP3S2P59780 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.19□□□□□ -0.46
AP3S2P59780 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.19□□□□□ -0.46
AP3S2P59780 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.19□□□□□ -0.46
AP3S2P59780 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.19□□□□□ -0.46
AP3S2P59780 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.19□□□□□ -0.46
AP3S2P59780 AC093520.2-201ENST00000561830 333 ntBASIC12.19□□□□□ -0.46
AP3S2P59780 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.19□□□□□ -0.46
AP3S2P59780 SPDYE12P-201ENST00000618416 771 ntBASIC12.19□□□□□ -0.46
AP3S2P59780 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
AP3S2P59780 AOC4P-203ENST00000566825 2289 ntBASIC12.19□□□□□ -0.46
AP3S2P59780 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC12.19□□□□□ -0.46
AP3S2P59780 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 AC134407.3-201ENST00000624035 2139 ntBASIC12.19□□□□□ -0.46
AP3S2P59780 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
AP3S2P59780 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S2P59780 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 AC018445.4-201ENST00000624066 2291 ntBASIC12.18□□□□□ -0.46
AP3S2P59780 AC092123.2-201ENST00000611189 5421 ntBASIC12.18□□□□□ -0.46
AP3S2P59780 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
AP3S2P59780 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
AP3S2P59780 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
AP3S2P59780 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
AP3S2P59780 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.18□□□□□ -0.46
AP3S2P59780 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S2P59780 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.18□□□□□ -0.46
AP3S2P59780 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.18□□□□□ -0.46
AP3S2P59780 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.18□□□□□ -0.46
AP3S2P59780 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.18□□□□□ -0.46
AP3S2P59780 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S2P59780 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.18□□□□□ -0.46
AP3S2P59780 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S2P59780 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 MTDHP5-201ENST00000598980 586 ntBASIC12.18□□□□□ -0.46
AP3S2P59780 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.18□□□□□ -0.46
AP3S2P59780 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S2P59780 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.18□□□□□ -0.46
AP3S2P59780 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S2P59780 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms