Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 IL10RA-201ENST00000227752 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 LINC00563-201ENST00000566370 1400 ntBASIC11.97□□□□□ -0.49
NKX2-5P52952 AR-208ENST00000612452 10676 ntTSL 5 BASIC11.97□□□□□ -0.49
NKX2-5P52952 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.97□□□□□ -0.49
NKX2-5P52952 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
NKX2-5P52952 SSR4P1-201ENST00000415143 412 ntBASIC11.97□□□□□ -0.49
NKX2-5P52952 LAGE3P1-201ENST00000425356 484 ntBASIC11.97□□□□□ -0.49
NKX2-5P52952 KRT18P27-201ENST00000427733 1299 ntBASIC11.97□□□□□ -0.49
NKX2-5P52952 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.97□□□□□ -0.49
NKX2-5P52952 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.97□□□□□ -0.49
NKX2-5P52952 FAAHP1-202ENST00000446499 1238 ntBASIC11.97□□□□□ -0.49
NKX2-5P52952 AC105233.2-201ENST00000523697 349 ntBASIC11.97□□□□□ -0.49
NKX2-5P52952 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.97□□□□□ -0.49
NKX2-5P52952 AF228730.5-201ENST00000530288 346 ntBASIC11.97□□□□□ -0.49
NKX2-5P52952 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
NKX2-5P52952 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.97□□□□□ -0.49
NKX2-5P52952 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.97□□□□□ -0.49
NKX2-5P52952 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.97□□□□□ -0.49
NKX2-5P52952 AC025062.2-201ENST00000605477 670 ntBASIC11.97□□□□□ -0.49
NKX2-5P52952 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
NKX2-5P52952 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 ZNHIT6-201ENST00000370574 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
NKX2-5P52952 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC11.97□□□□□ -0.49
NKX2-5P52952 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
NKX2-5P52952 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC11.97□□□□□ -0.49
NKX2-5P52952 LINC02080-201ENST00000585863 3085 ntTSL 2 BASIC11.97□□□□□ -0.49
NKX2-5P52952 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-5P52952 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.96□□□□□ -0.49
NKX2-5P52952 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
NKX2-5P52952 USP39-207ENST00000450066 2086 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX2-5P52952 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 NR2E1-201ENST00000368983 2612 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX2-5P52952 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX2-5P52952 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX2-5P52952 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX2-5P52952 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NKX2-5P52952 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
NKX2-5P52952 AC211429.1-201ENST00000415277 523 ntBASIC11.96□□□□□ -0.49
NKX2-5P52952 RBM17P3-201ENST00000417687 1192 ntBASIC11.96□□□□□ -0.49
NKX2-5P52952 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX2-5P52952 HIST3H2BA-201ENST00000436555 524 ntBASIC11.96□□□□□ -0.49
NKX2-5P52952 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.96□□□□□ -0.49
NKX2-5P52952 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
NKX2-5P52952 AC004066.1-201ENST00000502488 802 ntBASIC11.96□□□□□ -0.49
NKX2-5P52952 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX2-5P52952 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.96□□□□□ -0.49
NKX2-5P52952 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX2-5P52952 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NKX2-5P52952 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
NKX2-5P52952 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.96□□□□□ -0.49
NKX2-5P52952 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX2-5P52952 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-5P52952 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-5P52952 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC11.96□□□□□ -0.5
NKX2-5P52952 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-5P52952 LGALS9-203ENST00000395473 3114 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-5P52952 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
NKX2-5P52952 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-5P52952 GNG11-201ENST00000248564 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-5P52952 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
NKX2-5P52952 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.96□□□□□ -0.5
NKX2-5P52952 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC11.96□□□□□ -0.5
NKX2-5P52952 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-5P52952 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.5
NKX2-5P52952 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-5P52952 UBIAD1-202ENST00000376810 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-5P52952 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms