Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MTHFRP42898 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
MTHFRP42898 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.77□□□□□ -0.04
MTHFRP42898 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
MTHFRP42898 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.77□□□□□ -0.05
MTHFRP42898 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 AC092573.1-201ENST00000433054 884 ntBASIC14.77□□□□□ -0.05
MTHFRP42898 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.77□□□□□ -0.05
MTHFRP42898 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC14.77□□□□□ -0.05
MTHFRP42898 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.77□□□□□ -0.05
MTHFRP42898 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.77□□□□□ -0.05
MTHFRP42898 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.77□□□□□ -0.05
MTHFRP42898 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.77□□□□□ -0.05
MTHFRP42898 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.77□□□□□ -0.05
MTHFRP42898 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.77□□□□□ -0.05
MTHFRP42898 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.77□□□□□ -0.05
MTHFRP42898 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC14.77□□□□□ -0.05
MTHFRP42898 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 NAV1-210ENST00000593583 726 ntBASIC14.77□□□□□ -0.05
MTHFRP42898 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC14.77□□□□□ -0.05
MTHFRP42898 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.77□□□□□ -0.05
MTHFRP42898 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC14.77□□□□□ -0.05
MTHFRP42898 AP000769.1-203ENST00000637245 208 ntBASIC14.77□□□□□ -0.05
MTHFRP42898 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
MTHFRP42898 AC117489.1-201ENST00000625169 3217 ntBASIC14.77□□□□□ -0.05
MTHFRP42898 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
MTHFRP42898 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.77□□□□□ -0.05
MTHFRP42898 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MTHFRP42898 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.76□□□□□ -0.05
MTHFRP42898 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.76□□□□□ -0.05
MTHFRP42898 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
MTHFRP42898 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 KRT8P18-201ENST00000413425 1445 ntBASIC14.76□□□□□ -0.05
MTHFRP42898 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.76□□□□□ -0.05
MTHFRP42898 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.76□□□□□ -0.05
MTHFRP42898 AL122018.1-201ENST00000446607 2310 ntBASIC14.76□□□□□ -0.05
MTHFRP42898 AC140479.7-201ENST00000636301 2332 ntBASIC14.76□□□□□ -0.05
MTHFRP42898 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
MTHFRP42898 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
MTHFRP42898 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
MTHFRP42898 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 PTGER4P2-201ENST00000328411 252 ntBASIC14.76□□□□□ -0.05
MTHFRP42898 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
MTHFRP42898 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.76□□□□□ -0.05
MTHFRP42898 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.76□□□□□ -0.05
MTHFRP42898 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 AL929302.1-201ENST00000426556 871 ntBASIC14.76□□□□□ -0.05
MTHFRP42898 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.76□□□□□ -0.05
MTHFRP42898 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC14.76□□□□□ -0.05
MTHFRP42898 PTGER4P3-201ENST00000458150 252 ntBASIC14.76□□□□□ -0.05
MTHFRP42898 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
MTHFRP42898 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
MTHFRP42898 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.76□□□□□ -0.05
MTHFRP42898 AC027139.1-201ENST00000565286 951 ntBASIC14.76□□□□□ -0.05
MTHFRP42898 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.76□□□□□ -0.05
MTHFRP42898 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.76□□□□□ -0.05
MTHFRP42898 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC14.76□□□□□ -0.05
MTHFRP42898 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.76□□□□□ -0.05
MTHFRP42898 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.76□□□□□ -0.05
MTHFRP42898 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
MTHFRP42898 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.76□□□□□ -0.05
MTHFRP42898 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.76□□□□□ -0.05
MTHFRP42898 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MTHFRP42898 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms