Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HTTP42858 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HTTP42858 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HTTP42858 AL139424.2-202ENST00000641335 1369 ntBASIC15.21■□□□□ 0.03
HTTP42858 ATF4P4-201ENST00000393544 1930 ntBASIC15.21■□□□□ 0.03
HTTP42858 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HTTP42858 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC15.21■□□□□ 0.03
HTTP42858 AC092284.1-201ENST00000511386 1289 ntBASIC15.21■□□□□ 0.03
HTTP42858 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC15.21■□□□□ 0.03
HTTP42858 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
HTTP42858 AC090825.2-201ENST00000557959 739 ntBASIC15.21■□□□□ 0.03
HTTP42858 AC211476.2-201ENST00000608799 708 ntBASIC15.21■□□□□ 0.03
HTTP42858 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC15.21■□□□□ 0.03
HTTP42858 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTTP42858 USP8-219ENST00000625664 1568 ntTSL 5 BASIC15.21■□□□□ 0.03
HTTP42858 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTTP42858 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.21■□□□□ 0.03
HTTP42858 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HTTP42858 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTTP42858 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HTTP42858 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HTTP42858 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTTP42858 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HTTP42858 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.21■□□□□ 0.02
HTTP42858 SNORD88B-201ENST00000408454 91 ntBASIC15.21■□□□□ 0.02
HTTP42858 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC15.21■□□□□ 0.02
HTTP42858 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.02
HTTP42858 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC15.21■□□□□ 0.02
HTTP42858 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HTTP42858 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HTTP42858 MST1P2-201ENST00000457982 2291 ntBASIC15.21■□□□□ 0.02
HTTP42858 CD9-212ENST00000610354 1315 ntTSL 5 BASIC15.21■□□□□ 0.02
HTTP42858 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HTTP42858 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HTTP42858 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HTTP42858 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
HTTP42858 AL356583.1-201ENST00000398739 1371 ntBASIC15.21■□□□□ 0.02
HTTP42858 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
HTTP42858 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HTTP42858 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTTP42858 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.2■□□□□ 0.02
HTTP42858 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTTP42858 AC093462.1-201ENST00000621167 1683 ntBASIC15.2■□□□□ 0.02
HTTP42858 GSTM2P1-201ENST00000405166 654 ntBASIC15.2■□□□□ 0.02
HTTP42858 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC15.2■□□□□ 0.02
HTTP42858 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC15.2■□□□□ 0.02
HTTP42858 AL109954.3-201ENST00000615088 558 ntBASIC15.2■□□□□ 0.02
HTTP42858 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HTTP42858 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTTP42858 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.2■□□□□ 0.02
HTTP42858 AC245140.2-201ENST00000624054 1939 ntBASIC15.2■□□□□ 0.02
HTTP42858 NLK-203ENST00000582037 1503 ntTSL 2 BASIC15.2■□□□□ 0.02
HTTP42858 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HTTP42858 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.2■□□□□ 0.02
HTTP42858 AC040160.2-201ENST00000623816 1675 ntBASIC15.2■□□□□ 0.02
HTTP42858 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTTP42858 RN7SL111P-201ENST00000468841 285 ntBASIC15.2■□□□□ 0.02
HTTP42858 AL121992.3-201ENST00000606186 346 ntBASIC15.2■□□□□ 0.02
HTTP42858 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC15.2■□□□□ 0.02
HTTP42858 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.2■□□□□ 0.02
HTTP42858 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTTP42858 MKRN7P-201ENST00000433469 1371 ntBASIC15.2■□□□□ 0.02
HTTP42858 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC15.2■□□□□ 0.02
HTTP42858 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HTTP42858 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC15.2■□□□□ 0.02
HTTP42858 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.2■□□□□ 0.02
HTTP42858 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.2■□□□□ 0.02
HTTP42858 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HTTP42858 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.2■□□□□ 0.02
HTTP42858 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HTTP42858 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HTTP42858 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HTTP42858 AL157996.1-201ENST00000624684 2299 ntBASIC15.19■□□□□ 0.02
HTTP42858 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 TPM3P7-201ENST00000338274 732 ntBASIC15.19■□□□□ 0.02
HTTP42858 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC15.19■□□□□ 0.02
HTTP42858 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
HTTP42858 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HTTP42858 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HTTP42858 RN7SL452P-201ENST00000482923 291 ntBASIC15.19■□□□□ 0.02
HTTP42858 RAB42P1-201ENST00000555078 316 ntBASIC15.19■□□□□ 0.02
HTTP42858 RN7SL322P-201ENST00000583519 299 ntBASIC15.19■□□□□ 0.02
HTTP42858 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.19■□□□□ 0.02
HTTP42858 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HTTP42858 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
HTTP42858 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms