Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.58■□□□□ 0.56
USP6P35125 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.58■□□□□ 0.56
USP6P35125 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP6P35125 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6P35125 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
USP6P35125 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6P35125 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6P35125 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6P35125 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6P35125 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6P35125 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC18.58■□□□□ 0.56
USP6P35125 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP6P35125 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6P35125 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC18.58■□□□□ 0.56
USP6P35125 HDGF-202ENST00000368206 960 ntTSL 5 BASIC18.57■□□□□ 0.56
USP6P35125 SNORA50C-201ENST00000408535 133 ntBASIC18.57■□□□□ 0.56
USP6P35125 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC18.57■□□□□ 0.56
USP6P35125 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC18.57■□□□□ 0.56
USP6P35125 AC010202.1-201ENST00000551181 405 ntBASIC18.57■□□□□ 0.56
USP6P35125 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC18.57■□□□□ 0.56
USP6P35125 DUT-207ENST00000559416 635 ntTSL 2 BASIC18.57■□□□□ 0.56
USP6P35125 CCND3P2-201ENST00000579393 537 ntBASIC18.57■□□□□ 0.56
USP6P35125 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USP6P35125 SNORA50.1-201ENST00000628590 135 ntBASIC18.57■□□□□ 0.56
USP6P35125 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC18.57■□□□□ 0.56
USP6P35125 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC18.57■□□□□ 0.56
USP6P35125 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC18.57■□□□□ 0.56
USP6P35125 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.57■□□□□ 0.56
USP6P35125 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
USP6P35125 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC18.57■□□□□ 0.56
USP6P35125 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC18.57■□□□□ 0.56
USP6P35125 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC18.57■□□□□ 0.56
USP6P35125 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USP6P35125 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP6P35125 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP6P35125 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP6P35125 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 HSD3BP1-201ENST00000286193 1111 ntBASIC18.57■□□□□ 0.56
USP6P35125 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 SDCBP2P1-201ENST00000416115 614 ntBASIC18.57■□□□□ 0.56
USP6P35125 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC18.57■□□□□ 0.56
USP6P35125 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 AC147876.1-201ENST00000504408 322 ntBASIC18.57■□□□□ 0.56
USP6P35125 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 ACY3-202ENST00000529256 933 ntTSL 3 BASIC18.57■□□□□ 0.56
USP6P35125 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC18.57■□□□□ 0.56
USP6P35125 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP6P35125 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
USP6P35125 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP6P35125 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6P35125 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.56■□□□□ 0.56
USP6P35125 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP6P35125 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
USP6P35125 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC18.56■□□□□ 0.56
USP6P35125 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
USP6P35125 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.56■□□□□ 0.56
USP6P35125 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6P35125 CROCCP1-201ENST00000426910 5675 ntBASIC18.56■□□□□ 0.56
USP6P35125 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC18.56■□□□□ 0.56
USP6P35125 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6P35125 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC18.56■□□□□ 0.56
USP6P35125 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC18.56■□□□□ 0.56
USP6P35125 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC18.56■□□□□ 0.56
USP6P35125 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP6P35125 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6P35125 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6P35125 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6P35125 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6P35125 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6P35125 U73169.1-201ENST00000395152 367 ntBASIC18.56■□□□□ 0.56
USP6P35125 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC18.56■□□□□ 0.56
USP6P35125 FDPSP7-201ENST00000429043 1054 ntBASIC18.56■□□□□ 0.56
USP6P35125 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC18.56■□□□□ 0.56
USP6P35125 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC18.56■□□□□ 0.56
USP6P35125 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC18.56■□□□□ 0.56
USP6P35125 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC18.56■□□□□ 0.56
USP6P35125 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC18.56■□□□□ 0.56
USP6P35125 AC016582.2-202ENST00000587765 1094 ntBASIC18.56■□□□□ 0.56
USP6P35125 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC18.56■□□□□ 0.56
USP6P35125 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC18.56■□□□□ 0.56
USP6P35125 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6P35125 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6P35125 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.56■□□□□ 0.56
USP6P35125 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP6P35125 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
USP6P35125 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC18.55■□□□□ 0.56
USP6P35125 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
USP6P35125 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms