Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.16□□□□□ -0.46
CCL1P22362 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CCL1P22362 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CCL1P22362 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.16□□□□□ -0.46
CCL1P22362 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.15□□□□□ -0.46
CCL1P22362 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CCL1P22362 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CCL1P22362 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CCL1P22362 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL1P22362 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL1P22362 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 BEND3P3-201ENST00000611030 2440 ntBASIC12.15□□□□□ -0.46
CCL1P22362 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CCL1P22362 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CCL1P22362 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.15□□□□□ -0.46
CCL1P22362 BTBD6P1-201ENST00000412176 1267 ntBASIC12.15□□□□□ -0.46
CCL1P22362 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.15□□□□□ -0.46
CCL1P22362 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.15□□□□□ -0.46
CCL1P22362 AC005014.1-201ENST00000432006 2976 ntBASIC12.15□□□□□ -0.46
CCL1P22362 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.15□□□□□ -0.46
CCL1P22362 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.15□□□□□ -0.46
CCL1P22362 AC116345.2-201ENST00000512837 523 ntBASIC12.15□□□□□ -0.46
CCL1P22362 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL1P22362 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.15□□□□□ -0.46
CCL1P22362 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.15□□□□□ -0.46
CCL1P22362 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.15□□□□□ -0.46
CCL1P22362 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL1P22362 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL1P22362 AL022334.2-201ENST00000610000 484 ntBASIC12.15□□□□□ -0.46
CCL1P22362 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CCL1P22362 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL1P22362 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 COL6A4P2-202ENST00000504443 2753 ntBASIC12.15□□□□□ -0.46
CCL1P22362 Z98257.2-202ENST00000641138 1548 ntBASIC12.15□□□□□ -0.46
CCL1P22362 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CCL1P22362 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL1P22362 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL1P22362 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL1P22362 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CCL1P22362 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CCL1P22362 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
CCL1P22362 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.15□□□□□ -0.47
CCL1P22362 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
CCL1P22362 CICP20-201ENST00000443330 2801 ntBASIC12.15□□□□□ -0.47
CCL1P22362 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.14□□□□□ -0.47
CCL1P22362 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CCL1P22362 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CCL1P22362 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 LINC00638-201ENST00000555578 2518 ntBASIC12.14□□□□□ -0.47
CCL1P22362 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 AC083964.2-201ENST00000623988 2396 ntBASIC12.14□□□□□ -0.47
CCL1P22362 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.14□□□□□ -0.47
CCL1P22362 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.14□□□□□ -0.47
CCL1P22362 AC125807.2-201ENST00000513358 3514 ntBASIC12.14□□□□□ -0.47
CCL1P22362 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
CCL1P22362 AC002350.2-201ENST00000623894 1828 ntBASIC12.14□□□□□ -0.47
CCL1P22362 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CCL1P22362 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CCL1P22362 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms