Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.41□□□□□ -0.1
NFKB1P19838 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NFKB1P19838 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.4□□□□□ -0.1
NFKB1P19838 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NFKB1P19838 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
NFKB1P19838 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NFKB1P19838 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NFKB1P19838 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NFKB1P19838 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.4□□□□□ -0.1
NFKB1P19838 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NFKB1P19838 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NFKB1P19838 OR8T1P-201ENST00000421347 918 ntBASIC14.4□□□□□ -0.1
NFKB1P19838 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.4□□□□□ -0.1
NFKB1P19838 AC016700.1-201ENST00000429424 312 ntBASIC14.4□□□□□ -0.1
NFKB1P19838 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.4□□□□□ -0.1
NFKB1P19838 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.4□□□□□ -0.1
NFKB1P19838 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.4□□□□□ -0.1
NFKB1P19838 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 AL805961.1-203ENST00000641078 1258 ntBASIC14.4□□□□□ -0.1
NFKB1P19838 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NFKB1P19838 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 MEX3B-202ENST00000558133 4333 ntBASIC14.4□□□□□ -0.1
NFKB1P19838 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NFKB1P19838 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
NFKB1P19838 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.4□□□□□ -0.1
NFKB1P19838 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NFKB1P19838 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.4□□□□□ -0.1
NFKB1P19838 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
NFKB1P19838 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NFKB1P19838 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.39□□□□□ -0.11
NFKB1P19838 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NFKB1P19838 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NFKB1P19838 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NFKB1P19838 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.39□□□□□ -0.11
NFKB1P19838 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.39□□□□□ -0.11
NFKB1P19838 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 AC091804.1-201ENST00000486888 567 ntBASIC14.39□□□□□ -0.11
NFKB1P19838 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.39□□□□□ -0.11
NFKB1P19838 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NFKB1P19838 NAP1L6-202ENST00000641404 1222 ntBASIC14.39□□□□□ -0.11
NFKB1P19838 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms