Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC23.17■■□□□ 1.3
CFTRP13569 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC23.17■■□□□ 1.3
CFTRP13569 AC006273.1-201ENST00000606966 861 ntBASIC23.17■■□□□ 1.3
CFTRP13569 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC23.17■■□□□ 1.3
CFTRP13569 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC23.17■■□□□ 1.3
CFTRP13569 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC23.17■■□□□ 1.3
CFTRP13569 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC23.17■■□□□ 1.3
CFTRP13569 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
CFTRP13569 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFTRP13569 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CFTRP13569 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CFTRP13569 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CFTRP13569 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CFTRP13569 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CFTRP13569 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFTRP13569 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFTRP13569 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFTRP13569 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CFTRP13569 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC23.16■■□□□ 1.3
CFTRP13569 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFTRP13569 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CFTRP13569 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC23.16■■□□□ 1.3
CFTRP13569 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC23.16■■□□□ 1.3
CFTRP13569 RN7SL477P-201ENST00000488440 286 ntBASIC23.16■■□□□ 1.3
CFTRP13569 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC23.16■■□□□ 1.3
CFTRP13569 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC23.16■■□□□ 1.3
CFTRP13569 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC23.16■■□□□ 1.3
CFTRP13569 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC23.16■■□□□ 1.3
CFTRP13569 AC116036.2-201ENST00000607592 462 ntBASIC23.16■■□□□ 1.3
CFTRP13569 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC23.16■■□□□ 1.3
CFTRP13569 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CFTRP13569 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CFTRP13569 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC23.16■■□□□ 1.3
CFTRP13569 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CFTRP13569 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CFTRP13569 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CFTRP13569 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CFTRP13569 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC23.15■■□□□ 1.3
CFTRP13569 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFTRP13569 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
CFTRP13569 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CFTRP13569 HNRNPABP1-201ENST00000406003 734 ntBASIC23.15■■□□□ 1.3
CFTRP13569 RNA5SP407-201ENST00000410275 110 ntBASIC23.15■■□□□ 1.3
CFTRP13569 AC012513.2-201ENST00000441511 1137 ntBASIC23.15■■□□□ 1.3
CFTRP13569 AL137077.1-201ENST00000442115 528 ntBASIC23.15■■□□□ 1.3
CFTRP13569 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC23.15■■□□□ 1.3
CFTRP13569 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC23.15■■□□□ 1.3
CFTRP13569 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC23.15■■□□□ 1.3
CFTRP13569 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC23.15■■□□□ 1.3
CFTRP13569 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC23.15■■□□□ 1.3
CFTRP13569 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CFTRP13569 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC23.15■■□□□ 1.3
CFTRP13569 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC23.15■■□□□ 1.3
CFTRP13569 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC23.15■■□□□ 1.3
CFTRP13569 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFTRP13569 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFTRP13569 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFTRP13569 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFTRP13569 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CFTRP13569 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CFTRP13569 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC23.14■■□□□ 1.3
CFTRP13569 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CFTRP13569 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CFTRP13569 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFTRP13569 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CFTRP13569 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFTRP13569 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC23.14■■□□□ 1.29
CFTRP13569 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC23.14■■□□□ 1.29
CFTRP13569 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC23.14■■□□□ 1.29
CFTRP13569 AC005011.1-201ENST00000455206 210 ntBASIC23.14■■□□□ 1.29
CFTRP13569 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC23.14■■□□□ 1.29
CFTRP13569 ALG10-202ENST00000538927 571 ntTSL 5 BASIC23.14■■□□□ 1.29
CFTRP13569 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFTRP13569 AC063924.1-201ENST00000546680 673 ntBASIC23.14■■□□□ 1.29
CFTRP13569 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CFTRP13569 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CFTRP13569 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CFTRP13569 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFTRP13569 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC23.14■■□□□ 1.29
CFTRP13569 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFTRP13569 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFTRP13569 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC23.14■■□□□ 1.29
CFTRP13569 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
CFTRP13569 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CFTRP13569 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC23.13■■□□□ 1.29
CFTRP13569 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
CFTRP13569 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC23.13■■□□□ 1.29
CFTRP13569 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CFTRP13569 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC23.13■■□□□ 1.29
CFTRP13569 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFTRP13569 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CFTRP13569 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CFTRP13569 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CFTRP13569 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
CFTRP13569 POLR3DP1-201ENST00000398689 1176 ntBASIC23.13■■□□□ 1.29
CFTRP13569 RN7SL87P-201ENST00000497657 288 ntBASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms