Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.64■□□□□ 0.25
TOP1P11387 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.64■□□□□ 0.25
TOP1P11387 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.64■□□□□ 0.25
TOP1P11387 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.64■□□□□ 0.25
TOP1P11387 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.64■□□□□ 0.25
TOP1P11387 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.64■□□□□ 0.25
TOP1P11387 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.64■□□□□ 0.25
TOP1P11387 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.64■□□□□ 0.25
TOP1P11387 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.64■□□□□ 0.25
TOP1P11387 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TOP1P11387 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.64■□□□□ 0.25
TOP1P11387 AC103810.10-201ENST00000606504 343 ntBASIC16.64■□□□□ 0.25
TOP1P11387 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.64■□□□□ 0.25
TOP1P11387 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.64■□□□□ 0.25
TOP1P11387 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TOP1P11387 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TOP1P11387 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.64■□□□□ 0.25
TOP1P11387 AC067931.2-201ENST00000623655 2003 ntBASIC16.63■□□□□ 0.25
TOP1P11387 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 AC005252.3-201ENST00000623855 2258 ntBASIC16.63■□□□□ 0.25
TOP1P11387 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TOP1P11387 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.63■□□□□ 0.25
TOP1P11387 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TOP1P11387 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TOP1P11387 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.63■□□□□ 0.25
TOP1P11387 AC006987.1-201ENST00000413610 527 ntBASIC16.63■□□□□ 0.25
TOP1P11387 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.63■□□□□ 0.25
TOP1P11387 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.63■□□□□ 0.25
TOP1P11387 FTLP1-201ENST00000449155 526 ntBASIC16.63■□□□□ 0.25
TOP1P11387 NDUFS6P1-201ENST00000485187 316 ntBASIC16.63■□□□□ 0.25
TOP1P11387 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TOP1P11387 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.63■□□□□ 0.25
TOP1P11387 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.63■□□□□ 0.25
TOP1P11387 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.63■□□□□ 0.25
TOP1P11387 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.63■□□□□ 0.25
TOP1P11387 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.63■□□□□ 0.25
TOP1P11387 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.63■□□□□ 0.25
TOP1P11387 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.63■□□□□ 0.25
TOP1P11387 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.63■□□□□ 0.25
TOP1P11387 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOP1P11387 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.63■□□□□ 0.25
TOP1P11387 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.62■□□□□ 0.25
TOP1P11387 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TOP1P11387 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TOP1P11387 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.62■□□□□ 0.25
TOP1P11387 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TOP1P11387 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.62■□□□□ 0.25
TOP1P11387 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TOP1P11387 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 HMGA1P1-201ENST00000415560 1062 ntBASIC16.62■□□□□ 0.25
TOP1P11387 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.62■□□□□ 0.25
TOP1P11387 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TOP1P11387 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.62■□□□□ 0.25
TOP1P11387 CHCHD2P2-201ENST00000503744 321 ntBASIC16.62■□□□□ 0.25
TOP1P11387 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TOP1P11387 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TOP1P11387 NDUFB10P1-201ENST00000567319 521 ntBASIC16.62■□□□□ 0.25
TOP1P11387 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.62■□□□□ 0.25
TOP1P11387 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TOP1P11387 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.62■□□□□ 0.25
TOP1P11387 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TOP1P11387 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.62■□□□□ 0.25
TOP1P11387 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.62■□□□□ 0.25
TOP1P11387 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TOP1P11387 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TOP1P11387 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms