Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RPL18AP15-201ENST00000430258 517 ntBASIC14.95□□□□□ -0.02
TIMP1P01033 AL954722.1-201ENST00000431238 259 ntBASIC14.95□□□□□ -0.02
TIMP1P01033 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC14.95□□□□□ -0.02
TIMP1P01033 CDKN2A-AS1-201ENST00000441769 823 ntBASIC14.95□□□□□ -0.02
TIMP1P01033 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC14.95□□□□□ -0.02
TIMP1P01033 SNORA47-201ENST00000458862 138 ntBASIC14.95□□□□□ -0.02
TIMP1P01033 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC14.95□□□□□ -0.02
TIMP1P01033 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC14.95□□□□□ -0.02
TIMP1P01033 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC14.95□□□□□ -0.02
TIMP1P01033 RN7SL134P-201ENST00000579756 303 ntBASIC14.95□□□□□ -0.02
TIMP1P01033 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC14.95□□□□□ -0.02
TIMP1P01033 SNX20-205ENST00000610485 557 ntTSL 5 BASIC14.95□□□□□ -0.02
TIMP1P01033 AL450487.2-201ENST00000615934 407 ntBASIC14.95□□□□□ -0.02
TIMP1P01033 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.95□□□□□ -0.02
TIMP1P01033 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.95□□□□□ -0.02
TIMP1P01033 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TIMP1P01033 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.95□□□□□ -0.02
TIMP1P01033 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
TIMP1P01033 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TIMP1P01033 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TIMP1P01033 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
TIMP1P01033 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TIMP1P01033 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.94□□□□□ -0.02
TIMP1P01033 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC14.94□□□□□ -0.02
TIMP1P01033 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.94□□□□□ -0.02
TIMP1P01033 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TIMP1P01033 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TIMP1P01033 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TIMP1P01033 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC14.94□□□□□ -0.02
TIMP1P01033 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.94□□□□□ -0.02
TIMP1P01033 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC14.94□□□□□ -0.02
TIMP1P01033 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.94□□□□□ -0.02
TIMP1P01033 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC14.94□□□□□ -0.02
TIMP1P01033 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC14.94□□□□□ -0.02
TIMP1P01033 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC14.94□□□□□ -0.02
TIMP1P01033 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC14.94□□□□□ -0.02
TIMP1P01033 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC14.94□□□□□ -0.02
TIMP1P01033 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC14.94□□□□□ -0.02
TIMP1P01033 NF1P11-201ENST00000621292 1282 ntBASIC14.94□□□□□ -0.02
TIMP1P01033 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TIMP1P01033 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
TIMP1P01033 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.94□□□□□ -0.02
TIMP1P01033 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.94□□□□□ -0.02
TIMP1P01033 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.94□□□□□ -0.02
TIMP1P01033 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TIMP1P01033 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TIMP1P01033 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMP1P01033 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC14.94□□□□□ -0.02
TIMP1P01033 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.94□□□□□ -0.02
TIMP1P01033 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.93□□□□□ -0.02
TIMP1P01033 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.93□□□□□ -0.02
TIMP1P01033 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TIMP1P01033 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.93□□□□□ -0.02
TIMP1P01033 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.93□□□□□ -0.02
TIMP1P01033 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TIMP1P01033 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 RPSAP6-201ENST00000417882 882 ntBASIC14.93□□□□□ -0.02
TIMP1P01033 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 UGT1A12P-201ENST00000447084 853 ntBASIC14.93□□□□□ -0.02
TIMP1P01033 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC14.93□□□□□ -0.02
TIMP1P01033 AC113398.1-201ENST00000464124 406 ntBASIC14.93□□□□□ -0.02
TIMP1P01033 RPL29P2-202ENST00000498671 657 ntBASIC14.93□□□□□ -0.02
TIMP1P01033 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms