Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 AC018735.1-201ENST00000437208 1502 ntBASIC14.42□□□□□ -0.1
CCDC78A2IDD5 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 AC003686.1-201ENST00000550956 1034 ntBASIC14.42□□□□□ -0.1
CCDC78A2IDD5 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 AC007663.3-201ENST00000609632 465 ntBASIC14.42□□□□□ -0.1
CCDC78A2IDD5 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC78A2IDD5 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 FAM86MP-201ENST00000340703 885 ntBASIC14.41□□□□□ -0.1
CCDC78A2IDD5 MIR663B-201ENST00000408361 115 ntBASIC14.41□□□□□ -0.1
CCDC78A2IDD5 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 AC104073.2-201ENST00000453737 312 ntBASIC14.41□□□□□ -0.1
CCDC78A2IDD5 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 AC022217.1-201ENST00000521069 738 ntBASIC14.41□□□□□ -0.1
CCDC78A2IDD5 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms