Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 FXR1-207ENST00000468861 1989 ntTSL 2 BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 ARHGAP27-212ENST00000532038 3694 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 PCDHGB5-201ENST00000617380 4578 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 ERP29-201ENST00000261735 1735 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 FAM71F1-201ENST00000315184 1718 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 TMEM164-201ENST00000288381 5452 ntTSL 5 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 PELI1-201ENST00000358912 3750 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 KRT38-201ENST00000246646 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 TLR12P-201ENST00000413515 2706 ntBASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 USF1-203ENST00000368021 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 EIF4BP7-201ENST00000432307 1813 ntBASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 DIS3-205ENST00000545453 3651 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 PASK-215ENST00000544142 4724 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 TPTE-205ENST00000622113 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 ARL3-201ENST00000260746 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 AL392185.1-201ENST00000419620 395 ntTSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 GXYLT1P3-201ENST00000453058 1193 ntBASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 AC011840.4-201ENST00000578471 627 ntBASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 HSPA8P7-201ENST00000443628 1948 ntBASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 AC073578.3-201ENST00000624926 4191 ntBASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 TYRO3-202ENST00000559066 3876 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 PROS1-202ENST00000394236 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 RTEL1P1-201ENST00000504490 3685 ntBASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 C8A-201ENST00000361249 2356 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 SACS-202ENST00000402364 15134 ntTSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 MAP3K14-201ENST00000344686 4460 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 AL136982.4-201ENST00000437689 1740 ntBASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 AC245884.11-201ENST00000616950 1734 ntTSL 3 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 C1RL-AS1-201ENST00000382215 2086 ntTSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 BCAS3-202ENST00000407086 3496 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 PIK3CD-207ENST00000543390 3503 ntTSL 5 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 INMT-MINDY4-202ENST00000458257 2877 ntAPPRIS P5 TSL 2 BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LINC01558Q9Y6Z2 PAAF1-215ENST00000544909 1802 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 TUFT1-204ENST00000392712 2946 ntTSL 5 BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 TMEM164-202ENST00000372068 5566 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 SYT10-201ENST00000228567 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 OS9-202ENST00000315970 2691 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 IL36RN-201ENST00000346807 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 RPAP1-201ENST00000304330 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LINC01558Q9Y6Z2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms