Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 U3.5-201ENST00000363448 216 ntBASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 GULOP-201ENST00000454030 748 ntBASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 CSTP2-201ENST00000610599 398 ntBASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 AC027601.5-201ENST00000624065 2482 ntBASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 RCC2P5-201ENST00000492126 1487 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 NORAD-201ENST00000565493 5339 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 FAM90A21P-201ENST00000510875 1396 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 FAM90A15P-201ENST00000514465 1395 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 FAM90A6P-201ENST00000515148 1394 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 FAM90A16P-201ENST00000526662 1395 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 FAM90A9P-201ENST00000527940 1395 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 FAM90A5P-201ENST00000528738 1395 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 FAM90A14P-201ENST00000530386 1395 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 FAM90A13P-201ENST00000534703 1395 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 AC005077.3-201ENST00000449614 213 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 AC132812.1-201ENST00000583145 892 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 AC006158.1-201ENST00000610661 249 ntBASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPO2Q9UMS6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms