Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 KRT17P7-201ENST00000451704 1104 ntBASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 AC106886.1-201ENST00000568660 600 ntBASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 AC133540.1-201ENST00000620845 1019 ntBASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 IGHV3-72-202ENST00000621503 303 ntBASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 AP002761.4-201ENST00000565433 3361 ntBASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THUMPD1Q9NXG2 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 NME2P1-201ENST00000426182 414 ntBASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 AC005014.1-201ENST00000432006 2976 ntBASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 AC100827.2-201ENST00000563214 1194 ntBASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 AP006547.1-201ENST00000563435 692 ntBASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THUMPD1Q9NXG2 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms