Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 RNA5SP359-201ENST00000364838 113 ntBASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 AC010740.1-201ENST00000417035 684 ntBASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 AC134698.3-201ENST00000523880 214 ntBASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 RN7SL774P-201ENST00000577467 290 ntBASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 AC091544.8-201ENST00000619490 361 ntBASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 BEND3P1-201ENST00000421591 1944 ntBASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.78□□□□□ -0.2
CUEDC1Q9NWM3 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CUEDC1Q9NWM3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
CUEDC1Q9NWM3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CUEDC1Q9NWM3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CUEDC1Q9NWM3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.77□□□□□ -0.2
CUEDC1Q9NWM3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CUEDC1Q9NWM3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CUEDC1Q9NWM3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CUEDC1Q9NWM3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AC091046.1-201ENST00000331871 207 ntBASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AL355334.1-201ENST00000417713 215 ntBASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AC114501.1-201ENST00000445949 172 ntBASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 EEF1DP6-201ENST00000449232 372 ntBASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AL512310.5-201ENST00000551999 515 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms