Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL031673.1-201ENST00000611460 466 ntBASIC12.46□□□□□ -0.41
KIAA1549Q9HCM3 AC138466.5-201ENST00000624002 808 ntBASIC12.46□□□□□ -0.41
KIAA1549Q9HCM3 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC12.46□□□□□ -0.41
KIAA1549Q9HCM3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
KIAA1549Q9HCM3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.46□□□□□ -0.41
KIAA1549Q9HCM3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
KIAA1549Q9HCM3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
KIAA1549Q9HCM3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 KRT18P66-201ENST00000452970 1269 ntBASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 RN7SL396P-201ENST00000471086 295 ntBASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 AC009084.3-201ENST00000623356 437 ntBASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 ODCP-201ENST00000459650 1639 ntBASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 NRADDP-202ENST00000641269 1585 ntBASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 AC089987.1-201ENST00000551654 2209 ntBASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 RN7SL556P-201ENST00000582856 298 ntBASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 AL049840.2-201ENST00000602722 535 ntBASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 AC140113.1-201ENST00000603467 169 ntBASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
KIAA1549Q9HCM3 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 AC006529.1-201ENST00000459978 637 ntBASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 C2orf69P1-201ENST00000563532 1093 ntBASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms