Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 AL096828.3-201ENST00000615354 462 ntBASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 AL591471.1-201ENST00000621855 229 ntBASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UPF3BQ9BZI7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UPF3BQ9BZI7 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.96■□□□□ 0.3
UPF3BQ9BZI7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UPF3BQ9BZI7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
UPF3BQ9BZI7 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
UPF3BQ9BZI7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
UPF3BQ9BZI7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 FAM90A7P-201ENST00000382628 1395 ntBASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 FAM90A23P-201ENST00000400136 1395 ntBASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 AK2P2-201ENST00000439142 405 ntBASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 MTX1P1-201ENST00000440904 838 ntBASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 KRT18P15-201ENST00000458108 1291 ntBASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 AC010328.2-201ENST00000597698 1111 ntBASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 AC027612.1-201ENST00000445234 2395 ntBASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UPF3BQ9BZI7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 CARS-214ENST00000529772 2637 ntTSL 2 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 AC021723.1-201ENST00000486306 515 ntBASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 AC005324.6-201ENST00000587972 613 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms