Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 SERPINA13P-202ENST00000478994 924 ntBASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 MARK2P5-201ENST00000507649 634 ntBASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 IGHV3-71-201ENST00000523324 359 ntBASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 AC007336.3-201ENST00000623886 2160 ntBASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 KRT8P43-201ENST00000406052 1458 ntBASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 RNA5SP359-201ENST00000364838 113 ntBASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 AC017083.2-201ENST00000608069 979 ntBASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 MIR6805-201ENST00000615055 62 ntBASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 AC079336.7-201ENST00000623428 1078 ntBASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
RSPO3Q9BXY4 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms