Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 KRT8P24-201ENST00000560290 1559 ntBASIC12.65□□□□□ -0.38
VRK1Q99986 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
VRK1Q99986 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.65□□□□□ -0.38
VRK1Q99986 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VRK1Q99986 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.65□□□□□ -0.38
VRK1Q99986 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.65□□□□□ -0.38
VRK1Q99986 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 TMEM198B-204ENST00000484016 896 ntBASIC12.65□□□□□ -0.38
VRK1Q99986 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.65□□□□□ -0.38
VRK1Q99986 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.65□□□□□ -0.38
VRK1Q99986 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.65□□□□□ -0.38
VRK1Q99986 AC091544.8-201ENST00000619490 361 ntBASIC12.65□□□□□ -0.38
VRK1Q99986 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.65□□□□□ -0.38
VRK1Q99986 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.65□□□□□ -0.38
VRK1Q99986 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.65□□□□□ -0.38
VRK1Q99986 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VRK1Q99986 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.65□□□□□ -0.38
VRK1Q99986 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 PCDHA5-203ENST00000614258 4248 ntBASIC12.65□□□□□ -0.38
VRK1Q99986 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.65□□□□□ -0.38
VRK1Q99986 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
VRK1Q99986 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
VRK1Q99986 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
VRK1Q99986 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.64□□□□□ -0.39
VRK1Q99986 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VRK1Q99986 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.64□□□□□ -0.39
VRK1Q99986 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 AL138725.1-201ENST00000407347 1314 ntBASIC12.64□□□□□ -0.39
VRK1Q99986 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.64□□□□□ -0.39
VRK1Q99986 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.64□□□□□ -0.39
VRK1Q99986 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VRK1Q99986 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
VRK1Q99986 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.64□□□□□ -0.39
VRK1Q99986 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
VRK1Q99986 AC073548.1-201ENST00000624088 1882 ntBASIC12.64□□□□□ -0.39
VRK1Q99986 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.64□□□□□ -0.39
VRK1Q99986 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.64□□□□□ -0.39
VRK1Q99986 RN7SKP230-201ENST00000365642 335 ntBASIC12.64□□□□□ -0.39
VRK1Q99986 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.64□□□□□ -0.39
VRK1Q99986 MIR769-201ENST00000390225 118 ntBASIC12.64□□□□□ -0.39
VRK1Q99986 TUBB8P8-201ENST00000458717 1058 ntBASIC12.64□□□□□ -0.39
VRK1Q99986 HIST2H2BC-201ENST00000498492 580 ntBASIC12.64□□□□□ -0.39
VRK1Q99986 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.64□□□□□ -0.39
VRK1Q99986 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.64□□□□□ -0.39
VRK1Q99986 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.64□□□□□ -0.39
VRK1Q99986 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.64□□□□□ -0.39
VRK1Q99986 RN7SL163P-201ENST00000583100 276 ntBASIC12.64□□□□□ -0.39
VRK1Q99986 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.64□□□□□ -0.39
VRK1Q99986 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.64□□□□□ -0.39
VRK1Q99986 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VRK1Q99986 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.64□□□□□ -0.39
VRK1Q99986 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VRK1Q99986 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VRK1Q99986 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VRK1Q99986 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms