Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 AC152010.1-201ENST00000415779 2006 ntBASIC16.57■□□□□ 0.24
TRIM47Q96LD4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 MRPL37P1-201ENST00000592451 1337 ntBASIC16.56■□□□□ 0.24
TRIM47Q96LD4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 MIR645-201ENST00000385283 94 ntBASIC16.56■□□□□ 0.24
TRIM47Q96LD4 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 AC244197.1-201ENST00000456494 951 ntBASIC16.56■□□□□ 0.24
TRIM47Q96LD4 RN7SL494P-201ENST00000461517 304 ntBASIC16.56■□□□□ 0.24
TRIM47Q96LD4 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 OR5BD1P-201ENST00000532527 817 ntBASIC16.56■□□□□ 0.24
TRIM47Q96LD4 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 HMGB1P24-201ENST00000611897 328 ntBASIC16.56■□□□□ 0.24
TRIM47Q96LD4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 AGGF1P1-201ENST00000509500 2073 ntBASIC16.56■□□□□ 0.24
TRIM47Q96LD4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM47Q96LD4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AC006372.4-201ENST00000624122 1543 ntBASIC16.55■□□□□ 0.24
TRIM47Q96LD4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AC006504.5-208ENST00000588784 2401 ntBASIC16.55■□□□□ 0.24
TRIM47Q96LD4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms