Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 AL161932.2-201ENST00000435436 679 ntBASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 RPL7P3-201ENST00000441388 714 ntBASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 PUDPP3-201ENST00000445368 636 ntBASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 COX5BP1-201ENST00000507622 393 ntBASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 AP003171.2-201ENST00000528208 925 ntBASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 KRT17P8-201ENST00000540749 863 ntBASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 RN7SL713P-201ENST00000582127 302 ntBASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 AL035252.4-201ENST00000624174 288 ntBASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 MIR1202-201ENST00000408529 83 ntBASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 AC073413.1-201ENST00000603927 732 ntBASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 AC104506.1-201ENST00000609247 429 ntBASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 MVK-217ENST00000639206 367 ntTSL 5 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 AC002472.3-201ENST00000640124 621 ntBASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 AHCYP2-201ENST00000430630 1300 ntBASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 AC063926.2-201ENST00000623766 1308 ntBASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms