Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC010970.1-201ENST00000445125 1848 ntBASIC12.32□□□□□ -0.44
BEST4Q8NFU0 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 AGGF1P10-201ENST00000635005 2191 ntBASIC12.32□□□□□ -0.44
BEST4Q8NFU0 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 PI4KAP2-201ENST00000360806 2080 ntBASIC12.31□□□□□ -0.44
BEST4Q8NFU0 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 AC022144.1-201ENST00000602255 1580 ntBASIC12.31□□□□□ -0.44
BEST4Q8NFU0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 AL359845.1-201ENST00000458202 1648 ntBASIC12.31□□□□□ -0.44
BEST4Q8NFU0 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 SOCS2P1-201ENST00000417727 557 ntBASIC12.31□□□□□ -0.44
BEST4Q8NFU0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 AP005019.2-201ENST00000615104 511 ntBASIC12.31□□□□□ -0.44
BEST4Q8NFU0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 AC104758.3-203ENST00000562938 2123 ntBASIC12.31□□□□□ -0.44
BEST4Q8NFU0 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BEST4Q8NFU0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.3□□□□□ -0.44
BEST4Q8NFU0 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms