Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 EIF4HP1-201ENST00000453115 687 ntBASIC13.28□□□□□ -0.28
NUP43Q8NFH3 PFN1P12-201ENST00000455938 534 ntBASIC13.28□□□□□ -0.28
NUP43Q8NFH3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 RN7SL277P-201ENST00000481521 288 ntBASIC13.28□□□□□ -0.28
NUP43Q8NFH3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 MARK2P5-201ENST00000507649 634 ntBASIC13.28□□□□□ -0.28
NUP43Q8NFH3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 AL008638.5-201ENST00000623814 1298 ntBASIC13.28□□□□□ -0.28
NUP43Q8NFH3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 RPL13AP3-202ENST00000494676 1473 ntBASIC13.28□□□□□ -0.28
NUP43Q8NFH3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.27□□□□□ -0.28
NUP43Q8NFH3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 RCC2P8-201ENST00000502779 1035 ntBASIC13.27□□□□□ -0.29
NUP43Q8NFH3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 AC044849.1-201ENST00000519737 1188 ntBASIC13.27□□□□□ -0.29
NUP43Q8NFH3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 AL033527.4-201ENST00000641026 673 ntBASIC13.27□□□□□ -0.29
NUP43Q8NFH3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.27□□□□□ -0.29
NUP43Q8NFH3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 AL139158.3-201ENST00000641212 1562 ntBASIC13.27□□□□□ -0.29
NUP43Q8NFH3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms