Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 AGAP10P-201ENST00000454844 2418 ntBASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AC111170.3-201ENST00000624282 2464 ntBASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 RPS2P32-201ENST00000439199 892 ntBASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AC104073.2-201ENST00000453737 312 ntBASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AC005740.2-201ENST00000511085 419 ntBASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AC009779.1-201ENST00000551138 283 ntBASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AL132994.2-201ENST00000603120 687 ntBASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 CICP17-201ENST00000418553 2377 ntBASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 RPL13AP3-202ENST00000494676 1473 ntBASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TTC9CQ8N5M4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms