Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 MIR5001-201ENST00000580185 100 ntBASIC15.08■□□□□ 0
RNF135Q8IUD6 RN7SL357P-201ENST00000581065 298 ntBASIC15.08■□□□□ 0
RNF135Q8IUD6 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC15.08■□□□□ 0
RNF135Q8IUD6 BX088702.1-201ENST00000610784 235 ntBASIC15.08■□□□□ 0
RNF135Q8IUD6 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
RNF135Q8IUD6 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.08■□□□□ 0
RNF135Q8IUD6 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.08■□□□□ 0
RNF135Q8IUD6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
RNF135Q8IUD6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.08■□□□□ 0
RNF135Q8IUD6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.08■□□□□ 0
RNF135Q8IUD6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RNF135Q8IUD6 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.08■□□□□ 0
RNF135Q8IUD6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.08■□□□□ 0
RNF135Q8IUD6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.07■□□□□ 0
RNF135Q8IUD6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.07■□□□□ 0
RNF135Q8IUD6 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 TMBIM7P-202ENST00000641474 1516 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
RNF135Q8IUD6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.07■□□□□ 0
RNF135Q8IUD6 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 KRT17P5-201ENST00000332088 839 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 MIR566-201ENST00000385187 94 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 TLE1P1-201ENST00000422965 589 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.07■□□□□ 0
RNF135Q8IUD6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 RN7SL530P-201ENST00000485097 298 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC15.07■□□□□ 0
RNF135Q8IUD6 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.07■□□□□ 0
RNF135Q8IUD6 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.07■□□□□ 0
RNF135Q8IUD6 ABHD17AP9-201ENST00000561925 548 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 LINC01922-201ENST00000562582 719 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 AP005264.6-204ENST00000588436 719 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC15.07■□□□□ 0
RNF135Q8IUD6 AC021016.3-201ENST00000608367 477 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 AC007250.1-201ENST00000608934 338 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 AHCYP4-201ENST00000419201 1315 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 CTBP2P8-201ENST00000422584 1330 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 ENPP7P8-202ENST00000527856 1345 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RNF135Q8IUD6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 AL672207.1-201ENST00000328462 1570 ntBASIC15.07■□□□□ 0
RNF135Q8IUD6 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.07■□□□□ 0
RNF135Q8IUD6 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
RNF135Q8IUD6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.06■□□□□ 0
RNF135Q8IUD6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RNF135Q8IUD6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RNF135Q8IUD6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.06■□□□□ 0
RNF135Q8IUD6 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms