Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 ABCD1P2-201ENST00000429313 1601 ntBASIC12.84□□□□□ -0.35
ATG4DQ86TL0 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 RN7SKP214-201ENST00000364208 315 ntBASIC12.84□□□□□ -0.35
ATG4DQ86TL0 RNA5SP359-201ENST00000364838 113 ntBASIC12.84□□□□□ -0.35
ATG4DQ86TL0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 RPS9P1-201ENST00000419943 583 ntBASIC12.84□□□□□ -0.35
ATG4DQ86TL0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 AL645939.5-201ENST00000606834 243 ntBASIC12.84□□□□□ -0.35
ATG4DQ86TL0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 AC009474.1-201ENST00000455096 1565 ntBASIC12.84□□□□□ -0.35
ATG4DQ86TL0 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATG4DQ86TL0 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.83□□□□□ -0.35
ATG4DQ86TL0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.83□□□□□ -0.35
ATG4DQ86TL0 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ATG4DQ86TL0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 AGAP12P-201ENST00000585227 2359 ntBASIC12.83□□□□□ -0.36
ATG4DQ86TL0 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.83□□□□□ -0.36
ATG4DQ86TL0 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.83□□□□□ -0.36
ATG4DQ86TL0 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 AC084346.2-201ENST00000607097 949 ntBASIC12.83□□□□□ -0.36
ATG4DQ86TL0 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 AL359845.1-201ENST00000458202 1648 ntBASIC12.83□□□□□ -0.36
ATG4DQ86TL0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 AC025183.3-201ENST00000623526 1482 ntBASIC12.83□□□□□ -0.36
ATG4DQ86TL0 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms