Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 AC073548.1-201ENST00000624088 1882 ntBASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 FAM90A12P-201ENST00000519497 2375 ntBASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 FAM90A24P-201ENST00000520792 2369 ntBASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 RN7SL258P-201ENST00000478664 300 ntBASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 NUP210P1-202ENST00000504322 710 ntBASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 AL022334.2-201ENST00000610000 484 ntBASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 ELK2AP-201ENST00000392510 1007 ntBASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 AC007274.2-201ENST00000421675 662 ntBASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 PDIA3P2-201ENST00000428073 158 ntBASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 AC093752.3-201ENST00000567343 901 ntBASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 MIR4754-201ENST00000582477 89 ntBASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 AC020922.3-201ENST00000595064 547 ntBASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 AL353770.1-201ENST00000614915 403 ntBASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC39BQ5VTQ0 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms