Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
UBA52P62987 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
UBA52P62987 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
UBA52P62987 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 MIR1202-201ENST00000408529 83 ntBASIC12.37□□□□□ -0.43
UBA52P62987 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
UBA52P62987 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 MTX1P1-201ENST00000440904 838 ntBASIC12.37□□□□□ -0.43
UBA52P62987 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.37□□□□□ -0.43
UBA52P62987 AL591846.1-201ENST00000451736 433 ntBASIC12.37□□□□□ -0.43
UBA52P62987 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.37□□□□□ -0.43
UBA52P62987 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UBA52P62987 RNA5SP486-201ENST00000515961 83 ntBASIC12.37□□□□□ -0.43
UBA52P62987 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.37□□□□□ -0.43
UBA52P62987 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
UBA52P62987 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UBA52P62987 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.37□□□□□ -0.43
UBA52P62987 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 AC012617.1-204ENST00000586340 2305 ntBASIC12.37□□□□□ -0.43
UBA52P62987 AP001972.5-201ENST00000624624 2338 ntBASIC12.37□□□□□ -0.43
UBA52P62987 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
UBA52P62987 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.36□□□□□ -0.43
UBA52P62987 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.36□□□□□ -0.43
UBA52P62987 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBA52P62987 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
UBA52P62987 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBA52P62987 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.36□□□□□ -0.43
UBA52P62987 AP000437.1-201ENST00000624057 2085 ntBASIC12.36□□□□□ -0.43
UBA52P62987 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBA52P62987 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBA52P62987 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBA52P62987 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBA52P62987 DLX4-206ENST00000611342 1662 ntBASIC12.36□□□□□ -0.43
UBA52P62987 AL138709.1-201ENST00000614840 1693 ntBASIC12.36□□□□□ -0.43
UBA52P62987 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBA52P62987 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
UBA52P62987 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.36□□□□□ -0.43
UBA52P62987 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBA52P62987 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBA52P62987 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
UBA52P62987 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.36□□□□□ -0.43
UBA52P62987 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.36□□□□□ -0.43
UBA52P62987 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
UBA52P62987 HOMER2P2-201ENST00000451621 847 ntBASIC12.36□□□□□ -0.43
UBA52P62987 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.36□□□□□ -0.43
UBA52P62987 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBA52P62987 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
UBA52P62987 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.36□□□□□ -0.43
UBA52P62987 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBA52P62987 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
UBA52P62987 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.36□□□□□ -0.43
UBA52P62987 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.36□□□□□ -0.43
UBA52P62987 EEF1DP1-201ENST00000585891 896 ntBASIC12.36□□□□□ -0.43
UBA52P62987 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBA52P62987 AC005695.3-201ENST00000614522 232 ntBASIC12.36□□□□□ -0.43
UBA52P62987 BX539320.1-201ENST00000623759 877 ntBASIC12.36□□□□□ -0.43
UBA52P62987 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.36□□□□□ -0.43
UBA52P62987 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.36□□□□□ -0.43
UBA52P62987 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms