Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
RPL39P62891 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC10.07□□□□□ -0.8
RPL39P62891 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC10.07□□□□□ -0.8
RPL39P62891 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC10.07□□□□□ -0.8
RPL39P62891 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC10.07□□□□□ -0.8
RPL39P62891 PGGT1BP2-201ENST00000398621 1028 ntBASIC10.07□□□□□ -0.8
RPL39P62891 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC10.07□□□□□ -0.8
RPL39P62891 OSM-203ENST00000403463 464 ntTSL 3 BASIC10.07□□□□□ -0.8
RPL39P62891 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC10.07□□□□□ -0.8
RPL39P62891 POM121L8P-201ENST00000417732 1281 ntBASIC10.07□□□□□ -0.8
RPL39P62891 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC10.07□□□□□ -0.8
RPL39P62891 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC10.07□□□□□ -0.8
RPL39P62891 POM121L9P-203ENST00000441984 1285 ntBASIC10.07□□□□□ -0.8
RPL39P62891 GNAQP1-201ENST00000444815 1067 ntBASIC10.07□□□□□ -0.8
RPL39P62891 INE1-201ENST00000456273 945 ntBASIC10.07□□□□□ -0.8
RPL39P62891 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC10.07□□□□□ -0.8
RPL39P62891 FTLP10-202ENST00000505798 471 ntBASIC10.07□□□□□ -0.8
RPL39P62891 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC10.07□□□□□ -0.8
RPL39P62891 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.07□□□□□ -0.8
RPL39P62891 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC10.07□□□□□ -0.8
RPL39P62891 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC10.07□□□□□ -0.8
RPL39P62891 KSR1-207ENST00000578981 748 ntTSL 4 BASIC10.07□□□□□ -0.8
RPL39P62891 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC10.07□□□□□ -0.8
RPL39P62891 LSM12-202ENST00000585388 942 ntTSL 3 BASIC10.07□□□□□ -0.8
RPL39P62891 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC10.07□□□□□ -0.8
RPL39P62891 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC10.07□□□□□ -0.8
RPL39P62891 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC10.07□□□□□ -0.8
RPL39P62891 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC10.07□□□□□ -0.8
RPL39P62891 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
RPL39P62891 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
RPL39P62891 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC10.07□□□□□ -0.8
RPL39P62891 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC10.07□□□□□ -0.8
RPL39P62891 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RPL39P62891 MSNP1-201ENST00000511640 1732 ntBASIC10.07□□□□□ -0.8
RPL39P62891 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
RPL39P62891 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
RPL39P62891 AC011481.3-201ENST00000623895 5594 ntBASIC10.07□□□□□ -0.8
RPL39P62891 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC10.06□□□□□ -0.8
RPL39P62891 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 USE1-206ENST00000595101 1776 ntTSL 2 BASIC10.06□□□□□ -0.8
RPL39P62891 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC10.06□□□□□ -0.8
RPL39P62891 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC10.06□□□□□ -0.8
RPL39P62891 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 AC015819.3-201ENST00000624305 2674 ntBASIC10.06□□□□□ -0.8
RPL39P62891 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC10.06□□□□□ -0.8
RPL39P62891 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
RPL39P62891 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
RPL39P62891 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 VMA21-202ENST00000370361 693 ntTSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC10.06□□□□□ -0.8
RPL39P62891 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 IGHVIII-5-2-201ENST00000522505 261 ntBASIC10.06□□□□□ -0.8
RPL39P62891 AC068587.3-201ENST00000526613 355 ntBASIC10.06□□□□□ -0.8
RPL39P62891 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC10.06□□□□□ -0.8
RPL39P62891 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC10.06□□□□□ -0.8
RPL39P62891 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
RPL39P62891 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC10.06□□□□□ -0.8
RPL39P62891 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms