Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.72□□□□□ -0.37
VBP1P61758 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
VBP1P61758 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.72□□□□□ -0.37
VBP1P61758 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.72□□□□□ -0.37
VBP1P61758 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.72□□□□□ -0.37
VBP1P61758 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
VBP1P61758 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.72□□□□□ -0.37
VBP1P61758 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.72□□□□□ -0.37
VBP1P61758 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
VBP1P61758 AL359510.2-201ENST00000624958 2249 ntBASIC12.72□□□□□ -0.37
VBP1P61758 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VBP1P61758 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.72□□□□□ -0.37
VBP1P61758 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 RNU1-114P-201ENST00000365297 166 ntBASIC12.72□□□□□ -0.37
VBP1P61758 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
VBP1P61758 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.72□□□□□ -0.37
VBP1P61758 AC023274.1-201ENST00000418278 595 ntBASIC12.72□□□□□ -0.37
VBP1P61758 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.72□□□□□ -0.37
VBP1P61758 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.72□□□□□ -0.37
VBP1P61758 RPL13AP23-201ENST00000480739 586 ntBASIC12.72□□□□□ -0.37
VBP1P61758 GIMAP3P-201ENST00000495150 836 ntBASIC12.72□□□□□ -0.37
VBP1P61758 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.72□□□□□ -0.37
VBP1P61758 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.72□□□□□ -0.37
VBP1P61758 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.72□□□□□ -0.37
VBP1P61758 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 AC022145.2-201ENST00000598203 171 ntBASIC12.72□□□□□ -0.37
VBP1P61758 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.72□□□□□ -0.37
VBP1P61758 AL596442.2-201ENST00000610240 980 ntBASIC12.72□□□□□ -0.37
VBP1P61758 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
VBP1P61758 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VBP1P61758 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC12.72□□□□□ -0.37
VBP1P61758 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
VBP1P61758 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
VBP1P61758 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.72□□□□□ -0.37
VBP1P61758 AC020910.5-201ENST00000623668 1865 ntBASIC12.72□□□□□ -0.37
VBP1P61758 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 AC011481.3-201ENST00000623895 5594 ntBASIC12.72□□□□□ -0.37
VBP1P61758 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VBP1P61758 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.71□□□□□ -0.37
VBP1P61758 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
VBP1P61758 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
VBP1P61758 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC12.71□□□□□ -0.37
VBP1P61758 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
VBP1P61758 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
VBP1P61758 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.71□□□□□ -0.37
VBP1P61758 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
VBP1P61758 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
VBP1P61758 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.71□□□□□ -0.37
VBP1P61758 FO681548.1-201ENST00000455617 1132 ntBASIC12.71□□□□□ -0.37
VBP1P61758 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
VBP1P61758 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
VBP1P61758 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.71□□□□□ -0.37
VBP1P61758 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.71□□□□□ -0.37
VBP1P61758 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.71□□□□□ -0.37
VBP1P61758 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.71□□□□□ -0.37
VBP1P61758 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
VBP1P61758 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.71□□□□□ -0.37
VBP1P61758 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VBP1P61758 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms