Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.54□□□□□ -0.4
SEC61A1P61619 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 CLUHP2-201ENST00000426660 1303 ntBASIC12.54□□□□□ -0.4
SEC61A1P61619 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.54□□□□□ -0.4
SEC61A1P61619 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.54□□□□□ -0.4
SEC61A1P61619 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SEC61A1P61619 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SEC61A1P61619 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SEC61A1P61619 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC61A1P61619 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
SEC61A1P61619 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC61A1P61619 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 MIR326-201ENST00000362220 95 ntBASIC12.53□□□□□ -0.4
SEC61A1P61619 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC61A1P61619 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SEC61A1P61619 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.53□□□□□ -0.4
SEC61A1P61619 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SEC61A1P61619 CNN2P10-201ENST00000443067 918 ntBASIC12.53□□□□□ -0.4
SEC61A1P61619 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.53□□□□□ -0.4
SEC61A1P61619 AL391280.1-201ENST00000506969 1062 ntBASIC12.53□□□□□ -0.4
SEC61A1P61619 FAM86HP-204ENST00000513466 959 ntBASIC12.53□□□□□ -0.4
SEC61A1P61619 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.53□□□□□ -0.4
SEC61A1P61619 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.53□□□□□ -0.4
SEC61A1P61619 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.53□□□□□ -0.4
SEC61A1P61619 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.53□□□□□ -0.4
SEC61A1P61619 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.53□□□□□ -0.4
SEC61A1P61619 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SEC61A1P61619 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SEC61A1P61619 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC61A1P61619 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.53□□□□□ -0.4
SEC61A1P61619 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC61A1P61619 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC61A1P61619 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SEC61A1P61619 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SEC61A1P61619 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SEC61A1P61619 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC61A1P61619 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SEC61A1P61619 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC61A1P61619 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC61A1P61619 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC61A1P61619 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC61A1P61619 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SEC61A1P61619 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC61A1P61619 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SEC61A1P61619 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SEC61A1P61619 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
SEC61A1P61619 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC61A1P61619 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SEC61A1P61619 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.4
SEC61A1P61619 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.52□□□□□ -0.41
SEC61A1P61619 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SEC61A1P61619 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.52□□□□□ -0.41
SEC61A1P61619 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.52□□□□□ -0.41
SEC61A1P61619 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms