Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN6P56747 NAV1-210ENST00000593583 726 ntBASIC13.57□□□□□ -0.24
CLDN6P56747 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN6P56747 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN6P56747 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLDN6P56747 AC067750.1-201ENST00000608826 6545 ntBASIC13.57□□□□□ -0.24
CLDN6P56747 ENPP7P8-202ENST00000527856 1345 ntBASIC13.57□□□□□ -0.24
CLDN6P56747 ST20-AS1-201ENST00000560255 4223 ntBASIC13.57□□□□□ -0.24
CLDN6P56747 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN6P56747 AC018442.1-201ENST00000421439 2061 ntBASIC13.57□□□□□ -0.24
CLDN6P56747 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN6P56747 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN6P56747 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN6P56747 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.56□□□□□ -0.24
CLDN6P56747 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 AJ011931.1-201ENST00000618749 2492 ntBASIC13.56□□□□□ -0.24
CLDN6P56747 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN6P56747 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN6P56747 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 UROS-201ENST00000368774 744 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN6P56747 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN6P56747 AL512599.1-201ENST00000430724 685 ntBASIC13.56□□□□□ -0.24
CLDN6P56747 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC13.56□□□□□ -0.24
CLDN6P56747 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.56□□□□□ -0.24
CLDN6P56747 CASP3-205ENST00000517513 964 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.56□□□□□ -0.24
CLDN6P56747 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.56□□□□□ -0.24
CLDN6P56747 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CLDN6P56747 AC005586.2-201ENST00000563946 837 ntBASIC13.56□□□□□ -0.24
CLDN6P56747 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC13.56□□□□□ -0.24
CLDN6P56747 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
CLDN6P56747 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CLDN6P56747 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN6P56747 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CLDN6P56747 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CLDN6P56747 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN6P56747 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CLDN6P56747 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CLDN6P56747 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CLDN6P56747 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC13.55□□□□□ -0.24
CLDN6P56747 VENTXP4-201ENST00000449029 958 ntBASIC13.55□□□□□ -0.24
CLDN6P56747 AC092862.1-201ENST00000541534 533 ntBASIC13.55□□□□□ -0.24
CLDN6P56747 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.55□□□□□ -0.24
CLDN6P56747 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms