Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CACNB3P54284 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CACNB3P54284 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CACNB3P54284 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 PES1P2-201ENST00000449745 1735 ntBASIC16.6■□□□□ 0.25
CACNB3P54284 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.6■□□□□ 0.25
CACNB3P54284 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CACNB3P54284 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.6■□□□□ 0.25
CACNB3P54284 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.6■□□□□ 0.25
CACNB3P54284 KRT18P4-201ENST00000422599 1288 ntBASIC16.6■□□□□ 0.25
CACNB3P54284 PSAT1P2-201ENST00000426107 972 ntBASIC16.6■□□□□ 0.25
CACNB3P54284 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CACNB3P54284 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.6■□□□□ 0.25
CACNB3P54284 HLA-DPA2-205ENST00000433582 733 ntBASIC16.6■□□□□ 0.25
CACNB3P54284 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.6■□□□□ 0.25
CACNB3P54284 ASS1P2-201ENST00000439895 1223 ntBASIC16.6■□□□□ 0.25
CACNB3P54284 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 RN7SL288P-201ENST00000490496 291 ntBASIC16.6■□□□□ 0.25
CACNB3P54284 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CACNB3P54284 BAK1P2-201ENST00000532665 631 ntBASIC16.6■□□□□ 0.25
CACNB3P54284 AL359219.1-201ENST00000556311 934 ntBASIC16.6■□□□□ 0.25
CACNB3P54284 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.6■□□□□ 0.25
CACNB3P54284 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.6■□□□□ 0.25
CACNB3P54284 AL136982.5-201ENST00000605222 294 ntBASIC16.6■□□□□ 0.25
CACNB3P54284 AP003392.6-201ENST00000607709 325 ntBASIC16.6■□□□□ 0.25
CACNB3P54284 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.6■□□□□ 0.25
CACNB3P54284 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.6■□□□□ 0.25
CACNB3P54284 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.6■□□□□ 0.25
CACNB3P54284 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.6■□□□□ 0.25
CACNB3P54284 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 LINC00552-201ENST00000625151 2579 ntBASIC16.6■□□□□ 0.25
CACNB3P54284 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CACNB3P54284 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.59■□□□□ 0.25
CACNB3P54284 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CACNB3P54284 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC16.59■□□□□ 0.25
CACNB3P54284 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.59■□□□□ 0.25
CACNB3P54284 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.59■□□□□ 0.25
CACNB3P54284 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.59■□□□□ 0.25
CACNB3P54284 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC16.59■□□□□ 0.25
CACNB3P54284 VENTXP4-201ENST00000449029 958 ntBASIC16.59■□□□□ 0.25
CACNB3P54284 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 RN7SL351P-201ENST00000469306 248 ntBASIC16.59■□□□□ 0.25
CACNB3P54284 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.59■□□□□ 0.25
CACNB3P54284 HNRNPA1P56-201ENST00000505767 954 ntBASIC16.59■□□□□ 0.25
CACNB3P54284 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CACNB3P54284 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.59■□□□□ 0.25
CACNB3P54284 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.59■□□□□ 0.25
CACNB3P54284 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.59■□□□□ 0.25
CACNB3P54284 AC026336.4-201ENST00000624565 1050 ntBASIC16.59■□□□□ 0.25
CACNB3P54284 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CACNB3P54284 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC16.59■□□□□ 0.25
CACNB3P54284 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CACNB3P54284 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.59■□□□□ 0.25
CACNB3P54284 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CACNB3P54284 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CACNB3P54284 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CACNB3P54284 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CACNB3P54284 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CACNB3P54284 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNB3P54284 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CACNB3P54284 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CACNB3P54284 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
CACNB3P54284 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CACNB3P54284 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
CACNB3P54284 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.58■□□□□ 0.25
CACNB3P54284 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CACNB3P54284 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CACNB3P54284 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.58■□□□□ 0.25
CACNB3P54284 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms