Protein–RNA interactions for Protein: P53539

FOSB, Protein fosB, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOSBP53539 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
FOSBP53539 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOSBP53539 AC018629.1-201ENST00000623381 1736 ntBASIC16.67■□□□□ 0.26
FOSBP53539 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.67■□□□□ 0.26
FOSBP53539 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOSBP53539 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOSBP53539 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
FOSBP53539 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOSBP53539 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
FOSBP53539 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOSBP53539 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.67■□□□□ 0.26
FOSBP53539 LAP3P2-201ENST00000454686 1454 ntBASIC16.67■□□□□ 0.26
FOSBP53539 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOSBP53539 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOSBP53539 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOSBP53539 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.67■□□□□ 0.26
FOSBP53539 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
FOSBP53539 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
FOSBP53539 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.66■□□□□ 0.26
FOSBP53539 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
FOSBP53539 CCT8L1P-201ENST00000465400 1674 ntBASIC16.66■□□□□ 0.26
FOSBP53539 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.66■□□□□ 0.26
FOSBP53539 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.66■□□□□ 0.26
FOSBP53539 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.66■□□□□ 0.26
FOSBP53539 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.66■□□□□ 0.26
FOSBP53539 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.66■□□□□ 0.26
FOSBP53539 OR2R1P-201ENST00000441404 914 ntBASIC16.66■□□□□ 0.26
FOSBP53539 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.66■□□□□ 0.26
FOSBP53539 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
FOSBP53539 FAM86HP-204ENST00000513466 959 ntBASIC16.66■□□□□ 0.26
FOSBP53539 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.66■□□□□ 0.26
FOSBP53539 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 DUX4L45-201ENST00000566406 1057 ntBASIC16.66■□□□□ 0.26
FOSBP53539 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.66■□□□□ 0.26
FOSBP53539 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
FOSBP53539 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC16.66■□□□□ 0.26
FOSBP53539 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.66■□□□□ 0.26
FOSBP53539 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.66■□□□□ 0.26
FOSBP53539 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.66■□□□□ 0.26
FOSBP53539 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
FOSBP53539 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
FOSBP53539 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
FOSBP53539 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
FOSBP53539 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOSBP53539 PCDHA6-201ENST00000378126 3267 ntBASIC16.65■□□□□ 0.26
FOSBP53539 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.65■□□□□ 0.26
FOSBP53539 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16.65■□□□□ 0.26
FOSBP53539 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.65■□□□□ 0.26
FOSBP53539 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
FOSBP53539 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
FOSBP53539 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
FOSBP53539 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
FOSBP53539 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
FOSBP53539 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.65■□□□□ 0.26
FOSBP53539 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
FOSBP53539 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
FOSBP53539 KRT18P36-201ENST00000411618 1276 ntBASIC16.65■□□□□ 0.26
FOSBP53539 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.65■□□□□ 0.26
FOSBP53539 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 GOLGA2P4-201ENST00000441462 777 ntBASIC16.65■□□□□ 0.26
FOSBP53539 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC16.65■□□□□ 0.26
FOSBP53539 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC16.65■□□□□ 0.26
FOSBP53539 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.65■□□□□ 0.26
FOSBP53539 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.65■□□□□ 0.26
FOSBP53539 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC16.65■□□□□ 0.26
FOSBP53539 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.65■□□□□ 0.26
FOSBP53539 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
FOSBP53539 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.65■□□□□ 0.26
FOSBP53539 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.65■□□□□ 0.26
FOSBP53539 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOSBP53539 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms